Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0634
(434 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 45 4e-07
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 5.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 5.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 5.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 5.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 8.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 8.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 8.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 8.9
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 20 8.9
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 20 8.9
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 20 8.9
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 20 8.9
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 20 8.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 44.8 bits (101), Expect = 4e-07
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+VL+ T + ARG+D++ V VINYDLP + + Y+H
Sbjct: 461 KVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVH 495
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 305 TVKIIFTGLDEVDVLVVGN 249
T + F LDE++V V GN
Sbjct: 133 TTGVNFMKLDEIEVKVTGN 151
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 155 HITGHFNDTSVVEVLNILQCSPVSFS 232
+ GH+ + V+ + CSP FS
Sbjct: 207 YAVGHWMQKATEHVIGCVLCSPGCFS 232
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 155 HITGHFNDTSVVEVLNILQCSPVSFS 232
+ GH+ + V+ + CSP FS
Sbjct: 521 YAVGHWMQKATEHVIGCVLCSPGCFS 546
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 155 HITGHFNDTSVVEVLNILQCSPVSFS 232
+ GH+ + V+ + CSP FS
Sbjct: 754 YAVGHWMQKATEHVIGCVLCSPGCFS 779
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 155 HITGHFNDTSVVEVLNILQCSPVSFS 232
+ GH+ + V+ + CSP FS
Sbjct: 754 YAVGHWMQKATEHVIGCVLCSPGCFS 779
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 164 GHFNDTSVVEVLNILQCSPVSFS 232
GH+ + V+ + CSP FS
Sbjct: 784 GHWLQKATEHVIGCVLCSPGCFS 806
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 164 GHFNDTSVVEVLNILQCSPVSFS 232
GH+ + V+ + CSP FS
Sbjct: 784 GHWLQKATEHVIGCVLCSPGCFS 806
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 164 GHFNDTSVVEVLNILQCSPVSFS 232
GH+ + V+ + CSP FS
Sbjct: 784 GHWLQKATEHVIGCVLCSPGCFS 806
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 164 GHFNDTSVVEVLNILQCSPVSFS 232
GH+ + V+ + CSP FS
Sbjct: 784 GHWLQKATEHVIGCVLCSPGCFS 806
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory
receptor candidate 56 protein.
Length = 358
Score = 20.2 bits (40), Expect = 8.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 94 CDIYKKIYPL 65
CD+Y I+PL
Sbjct: 14 CDVYTAIHPL 23
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 20.2 bits (40), Expect = 8.9
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 133 YIFPIYILCPAFYCDIYKKIYPLSL*NALW 44
++ PI+ +C F Y SL + LW
Sbjct: 10 FLRPIFAVCRLFALVPYYNFEKFSLEHQLW 39
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory
receptor candidate 21 protein.
Length = 386
Score = 20.2 bits (40), Expect = 8.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 94 CDIYKKIYPL 65
CD+Y I+PL
Sbjct: 14 CDVYTAIHPL 23
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 234 TKLIAIPYDQNVH 272
TK+ +P D+N+H
Sbjct: 5 TKIFPVPGDKNLH 17
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 20.2 bits (40), Expect = 8.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 234 TKLIAIPYDQNVH 272
TK+ +P D+N+H
Sbjct: 5 TKIFPVPGDKNLH 17
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,513
Number of Sequences: 336
Number of extensions: 2108
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9670396
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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