Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0634
(434 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 5e-13
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 50 1e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 48 3e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 48 3e-06
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 45 2e-05
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 45 2e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 44 5e-05
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 44 7e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 44 7e-05
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 43 1e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 42 2e-04
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 42 2e-04
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 42 2e-04
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 42 2e-04
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 42 2e-04
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 40 0.001
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 40 0.001
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 36 0.014
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 33 0.13
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 31 0.41
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 29 1.3
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 29 2.2
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 28 3.8
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 28 3.8
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_45301| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_58731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 70.5 bits (165), Expect = 5e-13
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLITTDLLARGIDV QVS VINYDLPSNRENYIH
Sbjct: 382 RVLITTDLLARGIDVHQVSLVINYDLPSNRENYIH 416
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLI+TD+ ARG+DVQQVS VINYDLP+NRE YIH
Sbjct: 288 RVLISTDVWARGLDVQQVSLVINYDLPNNRELYIH 322
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFV D R L+DIE +Y T I EMP +VA+LI
Sbjct: 334 GVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI 370
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R+LI+TDL ARGID + V+ V+N D+P N E Y+H
Sbjct: 266 RILISTDLTARGIDAENVNLVVNMDVPHNGETYLH 300
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 48.0 bits (109), Expect = 3e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R L+ +DL RGID+Q V+ VIN+D P N E Y+H
Sbjct: 343 RNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLH 377
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPS 161
G+AIN +T DR L IE+ T I +PS
Sbjct: 389 GVAINLITYDDRFDLYKIENELDTEIKPIPS 419
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 48.0 bits (109), Expect = 3e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R L+ +DL RGID+Q V+ VIN+D P N E Y+H
Sbjct: 343 RNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLH 377
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPS 161
G+AIN +T DR L IE+ T I +PS
Sbjct: 389 GVAINLITYDDRFDLYKIENELDTEIKPIPS 419
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 47.6 bits (108), Expect = 4e-06
Identities = 17/35 (48%), Positives = 28/35 (80%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R+LI TD+ +RG+D++ ++ VINYD P + E+Y+H
Sbjct: 94 RILIATDVASRGLDIKDITYVINYDFPRHIEDYVH 128
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 45.2 bits (102), Expect = 2e-05
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R+L+ T+L RG+D+++V+ V NYD+P + + Y+H
Sbjct: 14 RMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 48
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 45.2 bits (102), Expect = 2e-05
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R+L+ T+L RG+D+++V+ V NYD+P + + Y+H
Sbjct: 387 RMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 421
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 265 FWS*GIAINFVT-EADRRALKDIEDFYHTSIVEMPSDV 155
F + G+AI FV+ EAD + L +++D + ++ E+P ++
Sbjct: 429 FGTKGLAITFVSDEADAKTLNEVQDRFEVNVGELPDEI 466
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T++ ARG+D+ V VIN+DLPS+ + Y+H
Sbjct: 1015 VLIATNVAARGLDIDDVKHVINFDLPSDIDEYVH 1048
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 44.0 bits (99), Expect = 5e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ +RG+D +V+ VINYDLP E YIH
Sbjct: 385 ILVATDVASRGLDFPEVTHVINYDLPDTIECYIH 418
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 43.6 bits (98), Expect = 7e-05
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T+L+ RGID + V+ VINYD P++ YIH
Sbjct: 436 VLIATELMGRGIDFKGVNLVINYDFPTSAVAYIH 469
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRE 298
++LITT++ ARGIDV+QV+ VINYD+P + +
Sbjct: 396 KLLITTNVSARGIDVEQVTLVINYDMPMDMQ 426
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ RGID++ VS VINYD+ E+Y H
Sbjct: 337 ILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTH 370
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ +RG+D VS VIN+D P++ +YIH
Sbjct: 749 ILVCTDIASRGLDTSDVSHVINFDFPNSMVDYIH 782
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ T + ARG+D+ V VIN+DLP++ E Y+H
Sbjct: 1153 ILVATAVAARGLDIPNVKHVINFDLPTDIEEYVH 1186
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 42.3 bits (95), Expect = 2e-04
Identities = 14/35 (40%), Positives = 28/35 (80%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++L+ TD+ +RG+D+ QV V+N ++P++ ++YIH
Sbjct: 299 KILVATDVASRGLDIPQVELVVNSNIPADPKDYIH 333
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 42.3 bits (95), Expect = 2e-04
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD++ARG+D+ +V+ VI YD PS+ ++H
Sbjct: 143 ILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVH 176
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 369 LLARGIDVQQVSCVINYDLPSNRENYIH 286
L RGID+Q V+ VIN+D P N E Y+H
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLH 29
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPS 161
G+AIN +T DR L IE+ T I +PS
Sbjct: 41 GVAINLITYDDRFDLYKIENELDTEIKPIPS 71
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 369 LLARGIDVQQVSCVINYDLPSNRENYIH 286
L RGID+Q V+ VIN+D P N E Y+H
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLH 29
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPS 161
G+AIN +T DR L IE+ T I +PS
Sbjct: 41 GVAINLITYDDRFDLYKIENELDTEIKPIPS 71
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYI 289
VL+ TD+ ++G+D + VIN+D+P + ENY+
Sbjct: 140 VLVATDVASKGLDFPDIQHVINFDMPEDIENYV 172
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYI 289
VL+ TD+ ++G+D + VIN+D+P + ENY+
Sbjct: 140 VLVATDVASKGLDFPDIQHVINFDMPEDIENYV 172
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ ARG+D+ + VI+Y +P + E Y+H
Sbjct: 509 LLLATDVAARGLDIANIEHVIHYQVPKDPEVYVH 542
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 37.1 bits (82), Expect = 0.006
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ ARG+D+ +V ++ YD + + YIH
Sbjct: 871 ILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIH 904
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 35.9 bits (79), Expect = 0.014
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R L+ TD+ ARG+D+ ++ V+ + P + + YIH
Sbjct: 356 RCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIH 390
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 35.5 bits (78), Expect = 0.019
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
V++ TD+ ARGID+ + VIN+ P + ++H
Sbjct: 528 VMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVH 561
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYI 289
RV++ T L G+D+ V +I++ +PS E+Y+
Sbjct: 313 RVVVATCALGMGVDIPDVDHIIHFGIPSEVEHYV 346
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 31.1 bits (67), Expect = 0.41
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYI 289
+L+ T ++ G+DV + + V+ +D P N +Y+
Sbjct: 147 LLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYV 179
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++L+ T+ RG+D +++ V ++P N E Y+H
Sbjct: 480 QLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLH 514
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 28.7 bits (61), Expect = 2.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 351 DVQQVSCVINYDLPSNRENYIH 286
D+ + VIN+D P+ E+Y+H
Sbjct: 351 DISDIKFVINFDFPNCTEDYVH 372
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
V+ L + + VS VIN+D+P E Y+H
Sbjct: 381 VVFVESKLGADMLAEAVSKVINFDMPPTYEEYVH 414
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYI 289
R + T G+D V +I+Y++P + E+Y+
Sbjct: 840 RAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYV 873
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 357 GIDVQQVSCVINYDLPSNRENYI 289
G+D+ V +I+Y +PS E+Y+
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYV 24
>SB_45301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 255 YDQNVHLVQSCEYNFHGWMADH 320
YD ++HL C FHG A+H
Sbjct: 67 YDYDLHLNHECWTTFHGKTAEH 88
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSN 304
++I T + G+D+ S VI YD+ N
Sbjct: 619 IIIATTVAEEGLDIDDCSYVIRYDMMGN 646
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 47 KCVSQAQWVDLLINIAIERRTQNINRKN 130
K A WVDL+I ++RT N+ + N
Sbjct: 121 KAKRPAGWVDLMIAFEAKKRTANLTKTN 148
>SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 86 NIAIERRTQNINRKNVGALDEVGHITGHFNDTSVVEVL---NILQCSPVSFSH 235
N IER N++ +++ AL + GH+ FN V ++ NI+ P S S+
Sbjct: 9 NTEIERVELNLSHRHLEALPDNGHVFS-FNPLKVTSLILQGNIISVLPDSISN 60
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSN 304
+LI T + G+D++ S VI YD N
Sbjct: 1001 ILIATSVAEEGLDIKDCSFVIRYDTYGN 1028
>SB_58731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 112 LCPAFYCDIYKKIYPLSL*NALWIL 38
+ PA IYKK+YPL N L +L
Sbjct: 703 IAPALELVIYKKVYPLEHKNTLLLL 727
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,943,456
Number of Sequences: 59808
Number of extensions: 238221
Number of successful extensions: 557
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 834771332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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