Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0634
(434 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 72 2e-13
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 72 2e-13
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 72 2e-13
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 59 1e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 59 1e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 49 2e-06
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 48 2e-06
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 48 3e-06
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 47 5e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 46 2e-05
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 45 2e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 44 4e-05
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 44 4e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 44 4e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 4e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 5e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 43 8e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 43 8e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 43 8e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 43 8e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 43 8e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 43 8e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 43 1e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 43 1e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 43 1e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 42 1e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 42 1e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 42 3e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 3e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 40 6e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 39 0.001
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.002
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 38 0.002
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 38 0.002
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.003
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 35 0.022
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 34 0.051
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 34 0.051
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 34 0.051
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 34 0.051
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 1.5
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 1.5
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 1.5
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 1.5
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 1.9
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 29 1.9
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 27 4.4
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 27 4.4
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 27 4.4
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 27 7.8
Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical pr... 27 7.8
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 27 7.8
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 27 7.8
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 71.7 bits (168), Expect = 2e-13
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLITTD+LARGIDVQQVS VINYDLPSNRENYIH
Sbjct: 320 RVLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
Score = 51.6 bits (118), Expect = 2e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 366 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 71.7 bits (168), Expect = 2e-13
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLITTD+LARGIDVQQVS VINYDLPSNRENYIH
Sbjct: 33 RVLITTDILARGIDVQQVSLVINYDLPSNRENYIH 67
Score = 51.6 bits (118), Expect = 2e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 79 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 115
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 71.7 bits (168), Expect = 2e-13
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLITTD+LARGIDVQQVS VINYDLPSNRENYIH
Sbjct: 320 RVLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
Score = 51.6 bits (118), Expect = 2e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 366 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLI+TD+ ARG+DV QVS VINYDLP+NRE YIH
Sbjct: 317 RVLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
Score = 46.8 bits (106), Expect = 7e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFV + D R L+DIE +Y T I EMP ++A++I
Sbjct: 363 GVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLI+TD+ ARG+DV QVS VINYDLP+NRE YIH
Sbjct: 317 RVLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
Score = 46.8 bits (106), Expect = 7e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFV + D R L+DIE +Y T I EMP ++A++I
Sbjct: 363 GVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R L+ +DLL RGID+Q V+ VIN+D P N E Y+H
Sbjct: 332 RNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLH 366
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 48.4 bits (110), Expect = 2e-06
Identities = 16/35 (45%), Positives = 28/35 (80%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R+L+ TDL RG+D+++V+ V NYD+P + ++Y+H
Sbjct: 335 RILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLH 369
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 48.4 bits (110), Expect = 2e-06
Identities = 16/35 (45%), Positives = 28/35 (80%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R+L+ TDL RG+D+++V+ V NYD+P + ++Y+H
Sbjct: 327 RILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLH 361
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 48.0 bits (109), Expect = 3e-06
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+++ TD+ ARG+DV + VINYD P+N E+Y+H
Sbjct: 429 IMLATDVAARGLDVDDIKFVINYDYPNNSEDYVH 462
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 47.6 bits (108), Expect = 4e-06
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
RVLI +D+LARG D+ +V CVINY+LP++ + ++H
Sbjct: 451 RVLICSDVLARGTDLNKVDCVINYNLPADDKLFVH 485
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 47.2 bits (107), Expect = 5e-06
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ ARG+D+ V VINYD+PS ++Y+H
Sbjct: 336 ILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVH 369
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLP 310
+VLITT++ ARGIDV QVS VINYDLP
Sbjct: 507 KVLITTNVFARGIDVAQVSVVINYDLP 533
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLP 310
+VLITT++ ARGIDV QVS VINYDLP
Sbjct: 532 KVLITTNVFARGIDVAQVSVVINYDLP 558
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLP 310
+VLITT++ ARGIDV QVS VINYDLP
Sbjct: 916 KVLITTNVFARGIDVAQVSVVINYDLP 942
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VL+ T+LL RG+D+ V VINYDLP++ +YIH
Sbjct: 428 VLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIH 461
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++L+ TDL +RGIDV ++ V+NYD P + E Y+H
Sbjct: 390 QILVATDLASRGIDVPDITHVLNYDFPMDIEEYVH 424
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYI 289
RVL+TTDL+ARG+++++ S +INYD+ N ENY+
Sbjct: 279 RVLVTTDLMARGMNIRK-SLIINYDVSGNMENYM 311
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 44.4 bits (100), Expect = 4e-05
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T ++ RG+D++ V VINYD+P+N ++YIH
Sbjct: 616 VLIATAVVERGLDIKGVDHVINYDMPNNIDDYIH 649
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 44.4 bits (100), Expect = 4e-05
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+VL+ T + ARG+DV+ + V+NYD P++ E+Y+H
Sbjct: 604 KVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVH 638
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 44.4 bits (100), Expect = 4e-05
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T ++ RG+D++ V VINYD+P+N ++YIH
Sbjct: 616 VLIATAVVERGLDIKGVDHVINYDMPNNIDDYIH 649
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.4 bits (100), Expect = 4e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VL+ TD+ ++G+D Q + VIN+D+P + ENY+H
Sbjct: 494 VLVATDVASKGLDFQGIEHVINFDMPEDIENYVH 527
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ T + ARG+D+ V VINYDLPS+ + Y+H
Sbjct: 480 ILVATAVAARGLDIPNVKHVINYDLPSDVDEYVH 513
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 43.6 bits (98), Expect = 6e-05
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ RGIDV+ VS V+NYD+ + E+Y H
Sbjct: 626 ILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTH 659
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T + RG+D++ V VINYD+P N ++YIH
Sbjct: 659 VLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T + RG+D++ V VINYD+P N ++YIH
Sbjct: 870 VLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T + RG+D++ V VINYD+P N ++YIH
Sbjct: 870 VLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T + RG+D++ V VINYD+P N ++YIH
Sbjct: 659 VLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T + RG+D++ V VINYD+P N ++YIH
Sbjct: 659 VLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI T + RG+D++ V VINYD+P N ++YIH
Sbjct: 870 VLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ T + ARG+D+ V VINYDLP + + Y+H
Sbjct: 451 ILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 484
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ T + ARG+D+ V VINYDLP + + Y+H
Sbjct: 435 ILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 468
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ T + ARG+D+ V VINYDLP + + Y+H
Sbjct: 432 ILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 465
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 42.3 bits (95), Expect = 1e-04
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++L+++DL ARGID V+ V+N D +N E Y H
Sbjct: 311 KILVSSDLTARGIDADNVNLVVNIDAAANEETYFH 345
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 42.3 bits (95), Expect = 1e-04
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++L+++DL ARGID V+ V+N D +N E Y H
Sbjct: 311 KILVSSDLTARGIDADNVNLVVNIDAAANEETYFH 345
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VL++TDL +RG+D++ V VIN ++P + + YIH
Sbjct: 470 VLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIH 503
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
V+I+TD++ARGID+ + VI +DLP + ++H
Sbjct: 312 VMISTDVMARGIDISDIDWVIQFDLPKHSSWFVH 345
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VL+ TD+ ARG+D+Q + VI+Y +P E YIH
Sbjct: 326 VLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIH 359
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VL+ TD+ ARG+D+Q + VI+Y +P E YIH
Sbjct: 493 VLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIH 526
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 40.3 bits (90), Expect = 6e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLP 310
+L+TTDLL+RGIDV + VIN+DLP
Sbjct: 699 LLVTTDLLSRGIDVSDLDRVINFDLP 724
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 39.1 bits (87), Expect = 0.001
Identities = 12/35 (34%), Positives = 26/35 (74%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++L+ TD+ ARG+D+ ++ VIN+D+ + + ++H
Sbjct: 562 QILVATDVAARGLDISEIRTVINFDMARDIDTHVH 596
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
R L+ +D++ARG+DVQ V VI+ LP + Y+H
Sbjct: 557 RFLVCSDVVARGLDVQGVPFVISVTLPDEKSMYVH 591
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+V+I TD+ +RG+D+ V V+N+++P + YIH
Sbjct: 389 QVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIH 423
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+V+I TD+ +RG+D+ V V+N+++P + YIH
Sbjct: 389 QVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIH 423
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
VLI TD+ +RG+D + + VI D P+ ++YIH
Sbjct: 375 VLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIH 408
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 35.1 bits (77), Expect = 0.022
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ ARG+D+ V ++ YD YIH
Sbjct: 367 ILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIH 400
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 33.9 bits (74), Expect = 0.051
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 366 LARGIDVQQVSCVINYDLPSNRENYIH 286
++RGID VS V+N+D P + YIH
Sbjct: 368 VSRGIDFHHVSNVVNFDFPETTDAYIH 394
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 33.9 bits (74), Expect = 0.051
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 366 LARGIDVQQVSCVINYDLPSNRENYIH 286
++RGID VS V+N+D P + YIH
Sbjct: 435 VSRGIDFHHVSNVVNFDFPETTDAYIH 461
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 33.9 bits (74), Expect = 0.051
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ ARG+D+ + VIN P + ++H
Sbjct: 318 ILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVH 351
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 33.9 bits (74), Expect = 0.051
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+L+ TD+ ARG+D+ + VIN P + ++H
Sbjct: 318 ILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVH 351
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
+V++ T GID V VI++ LP + ENY
Sbjct: 361 QVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 393
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
+V++ T GID V VI++ LP + ENY
Sbjct: 384 QVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 416
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSN 304
R+L++T + G+DV + S VI Y+ +N
Sbjct: 768 RILVSTSVAEEGLDVPECSLVIKYNYATN 796
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 390 RVLITTDLLARGIDVQQVSCVINYDLPSN 304
R+L++T + G+DV + S VI Y+ +N
Sbjct: 768 RILVSTSVAEEGLDVPECSLVIKYNYATN 796
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++ T++LARGIDV V I ++ ++ + Y H
Sbjct: 277 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKH 309
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++ T++LARGIDV V I ++ ++ + Y H
Sbjct: 430 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKH 462
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++ T++++RGIDV V I ++ ++ +Y+H
Sbjct: 428 VVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMH 460
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 27.5 bits (58), Expect = 4.4
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLP 310
++ +++ ARG+++ + V+NYD+P
Sbjct: 1056 MVASNVCARGLNIAGLDHVVNYDMP 1080
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 27.5 bits (58), Expect = 4.4
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLP 310
++ +++ ARG+++ + V+NYD+P
Sbjct: 1056 MVASNVCARGLNIAGLDHVVNYDMP 1080
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
V+ T GID V VI+Y LP + E Y
Sbjct: 522 VICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
>Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical
protein F59A1.13 protein.
Length = 421
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -3
Query: 165 PVMWPTSSKAPTFFRFIFCVLRSIAIFIRRSTH*ACETHFGY 40
P W +S+ TF + CV + I + CE+ FG+
Sbjct: 115 PGTWAPTSETGTFMAILSCVFQLSMIICMPVSGFLCESRFGW 156
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLPSNRENY 292
++ T GID V VI+Y P+N E+Y
Sbjct: 500 IVATVAFGMGIDKPDVRNVIHYGCPNNIESY 530
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 387 VLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
V+ T GID V VI+Y LP + E Y
Sbjct: 522 VICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,807,639
Number of Sequences: 27780
Number of extensions: 186333
Number of successful extensions: 515
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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