Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0633
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   0.90 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   0.90 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.6  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 16  GLECVRAGLFMLLFFC 63
           G+    AGLFM+ F+C
Sbjct: 307 GISFKEAGLFMIAFYC 322


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 16  GLECVRAGLFMLLFFC 63
           G+    AGLFM+ F+C
Sbjct: 307 GISFKEAGLFMIAFYC 322


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +3

Query: 198 CPKRIA*SFRVMRCSIQPPSTCN 266
           CP  +    R +RC + P   C+
Sbjct: 186 CPAMLVFDRRSLRCVVPPTEDCD 208


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 240  SIQPPSTCNHYHRQR*NSQHAR 305
            S +PPST NH+  +   S   R
Sbjct: 1173 SYRPPSTTNHWQTKTTTSTTTR 1194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,380
Number of Sequences: 336
Number of extensions: 1883
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)