Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0633
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.5  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   5.9  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   5.9  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   5.9  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   7.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 163  SAINKAIHAGRKIFLTINADGS 98
            SA NK+ HAG  I  ++N  G+
Sbjct: 1235 SATNKSFHAGLSIAASVNPHGN 1256


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = -3

Query: 241 EQRITLKDYAMRFGQTKTAKD 179
           EQ++  +++ + +G+  T+KD
Sbjct: 116 EQKLPCEEFGLMYGKNSTSKD 136


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 50  CCFFVTREGLYLFRINASISVY 115
           CC F T + +Y+FR   + S++
Sbjct: 210 CCTFNTLDTVYMFRNATAPSIF 231


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 50  CCFFVTREGLYLFRINASISVY 115
           CC F T + +Y+FR   + S++
Sbjct: 210 CCTFNTLDTVYMFRNATAPSIF 231


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 271  ITARGKIVNTHGVRYLSLAVXDL 339
            I +RG + N HG   L L V DL
Sbjct: 1231 IYSRGPLKNLHGNYTLELIVSDL 1253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,538
Number of Sequences: 2352
Number of extensions: 8420
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)