Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0630
         (421 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   2.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.5  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   4.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    22   7.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    22   7.9  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    22   7.9  

>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +1

Query: 19  PRPSEPKPTSPARGAPCRPTNEALARRGRHGT 114
           P  SEP  T       C PT   L     HGT
Sbjct: 273 PTTSEPPSTPHPTDPHCPPTGATLPNYWAHGT 304


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 4    HEVVLPRPSEPKPTSPARGAPCRPTN 81
            HE++L    + K  +P +G P R TN
Sbjct: 1857 HELMLEERFKRKNCAPLKGQPKRGTN 1882


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 302 LDSNPYYWKCFTSL 261
           LD+NP++ KC  SL
Sbjct: 49  LDANPHFVKCVASL 62


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 61   APCRPTNEALARRGRH 108
            +PC+PTN +L+    H
Sbjct: 1340 SPCKPTNGSLSPSATH 1355


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 61   APCRPTNEALARRGRH 108
            +PC+PTN +L+    H
Sbjct: 1337 SPCKPTNGSLSPSATH 1352


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = +3

Query: 156 ISN--DDTLNNDYVSNIQC 206
           ISN  DDT+N ++  N+ C
Sbjct: 606 ISNYADDTVNQEFDENVNC 624


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,480
Number of Sequences: 2352
Number of extensions: 6722
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)