Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0630
         (421 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro...    30   1.4  
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro...    30   1.4  
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P...    30   1.4  
U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.       29   2.5  
BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p pro...    29   2.5  
AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-P...    29   2.5  
AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-P...    29   2.5  
AE013599-1136|AAO41429.1|  720|Drosophila melanogaster CG12052-P...    28   5.8  

>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p
           protein.
          Length = 1455

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 22  RPSEPKPTSPARGAPCRPT-NEALARRGRHGTTV 120
           +PSEP P    RG P  P  ++A+   GRH   V
Sbjct: 206 KPSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEV 239


>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p
           protein.
          Length = 1454

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 22  RPSEPKPTSPARGAPCRPT-NEALARRGRHGTTV 120
           +PSEP P    RG P  P  ++A+   GRH   V
Sbjct: 205 KPSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEV 238


>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
           protein.
          Length = 1266

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 22  RPSEPKPTSPARGAPCRPT-NEALARRGRHGTTV 120
           +PSEP P    RG P  P  ++A+   GRH   V
Sbjct: 177 KPSEPSPVKRRRGRPPGPAKSQAMTTDGRHACEV 210


>U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.
          Length = 1262

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 19  PRPSEPKPTSPARGAPCRP 75
           PRP+ P+P  P + AP RP
Sbjct: 241 PRPAPPRPAPPGQAAPQRP 259


>BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p
           protein.
          Length = 1262

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 19  PRPSEPKPTSPARGAPCRP 75
           PRP+ P+P  P + AP RP
Sbjct: 241 PRPAPPRPAPPGQAAPQRP 259


>AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-PB,
           isoform B protein.
          Length = 1260

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 19  PRPSEPKPTSPARGAPCRP 75
           PRP+ P+P  P + AP RP
Sbjct: 241 PRPAPPRPAPPGQAAPQRP 259


>AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-PA,
           isoform A protein.
          Length = 1260

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 19  PRPSEPKPTSPARGAPCRP 75
           PRP+ P+P  P + AP RP
Sbjct: 241 PRPAPPRPAPPGQAAPQRP 259


>AE013599-1136|AAO41429.1|  720|Drosophila melanogaster CG12052-PS,
           isoform S protein.
          Length = 720

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 410 HQRPEQ*PRLINVSLPYFGDTFTHIMTIRI-KSTPKALDSNP 288
           H  P      +N + PYF      ++++RI K + + LD NP
Sbjct: 463 HTTPPAISLFLNSTTPYFDSLSLSVLSVRIVKQSQQILDKNP 504


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,769,168
Number of Sequences: 53049
Number of extensions: 292543
Number of successful extensions: 1022
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)