BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0629
(440 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146741-1|AAO12101.1| 131|Anopheles gambiae odorant-binding pr... 23 4.8
AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein. 23 6.4
AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein. 23 6.4
AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein. 23 6.4
AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein. 23 6.4
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 22 8.4
>AY146741-1|AAO12101.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP10 protein.
Length = 131
Score = 23.0 bits (47), Expect = 4.8
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 17 NVHCVATM*TTLRNINTNPLWLCCVRLRF 103
++HC ++ +L + + +P+W C V+ F
Sbjct: 40 SLHCSLSLSLSLLSPSFSPIWQCFVQCFF 68
>AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 22.6 bits (46), Expect = 6.4
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 282 TIPQQHEWNKVV 247
T PQ+H+WN+ +
Sbjct: 88 TPPQKHQWNQTI 99
>AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 22.6 bits (46), Expect = 6.4
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 282 TIPQQHEWNKVV 247
T PQ+H+WN+ +
Sbjct: 88 TPPQKHQWNQTI 99
>AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 22.6 bits (46), Expect = 6.4
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 282 TIPQQHEWNKVV 247
T PQ+H+WN+ +
Sbjct: 88 TPPQKHQWNQTI 99
>AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 22.6 bits (46), Expect = 6.4
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 282 TIPQQHEWNKVV 247
T PQ+H+WN+ +
Sbjct: 88 TPPQKHQWNQTI 99
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 22.2 bits (45), Expect = 8.4
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 417 LKYFFFLIINFRIMDRMKTYDDAXLKQEDAKS*C 316
++Y FF++++ DR++ +D+ + DA S C
Sbjct: 597 IEYDFFVMVSDFAQDRVEDFDE-NVNCNDAHSFC 629
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,868
Number of Sequences: 2352
Number of extensions: 7197
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -