Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0629
         (440 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125484-1|BAC86178.1|  148|Homo sapiens protein ( Homo sapiens ...    30   3.1  
AK130327-1|BAC85328.1|  131|Homo sapiens protein ( Homo sapiens ...    29   5.4  
AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    29   5.4  
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    29   7.1  
AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>AK125484-1|BAC86178.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43495 fis, clone PEBLM2000338. ).
          Length = 148

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 87  VCAYDLTNACVCLMFCRCVHV*TQYQFFKMYLYFFFCILYYNLC 218
           +C Y       C+  C  +HV     +  +YLY + C++Y ++C
Sbjct: 1   MCVYTYICEYRCIYVCIYIHVFVYVCY--IYLYVYVCVIYIHVC 42


>AK130327-1|BAC85328.1|  131|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26817 fis, clone PRS06446. ).
          Length = 131

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 114 CVCLMFCRCVHV*TQYQFFKMYLYFFFCILY 206
           CVC+  C CV++    +   +YL+ F  ++Y
Sbjct: 4   CVCVCVCVCVYIYIYIKPHFLYLFLFLSLIY 34


>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 81  CV-VCAYDLTNACVCLMFCRCVHV*TQYQFFKMYLYFFFCILYY 209
           C+ +C +  T  C+C+  C C+HV T   +  +Y+    C+  Y
Sbjct: 160 CIHICIFIYTYVCMCV--CSCIHVYT-CVYIHIYIGMHICVYSY 200


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +3

Query: 18  MFIASRQCRQRCAI*ILTRSGCVVCAYDLTNACVCLMFCRCVHV*TQYQFFKMYL--YFF 191
           M I    C   C I I T + C+ C +  T+AC+C+  C  V++ + +    +Y+  + +
Sbjct: 124 MCIHMYTCMHMC-IFICTHA-CI-CVFTSTHACICVFTCTHVYI-SVFTCTHVYICVFIY 179

Query: 192 FCILYY 209
            CI  Y
Sbjct: 180 ICIHVY 185


>AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37556 fis, clone BRCAN2028545. ).
          Length = 149

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
 Frame = +3

Query: 15  TMFIASRQCRQRCAI*ILTRS--GC-VVCAYDLTNACVCLMFCRCVHV 149
           T+ I +R C   CA   +  S   C   C Y     C C   C CV V
Sbjct: 76  TVHICARVCECACACVYVRMSVHECKCACVYVCKRVCTCACVCMCVQV 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,921,051
Number of Sequences: 237096
Number of extensions: 793469
Number of successful extensions: 1371
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)