Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0629
(440 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 2.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 2.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 2.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 2.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 2.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 2.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 2.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 2.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 2.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 2.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 2.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 2.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 2.6
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 3.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 3.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 3.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.5
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 6.0
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 7.9
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 7.9
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 2.0
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 93 AYDLTNACVC-LMFCRCVHV*TQYQFFKMYLYFFFCILYYNLCW 221
+Y ++ C+ LMF C+ + + + Y I YY CW
Sbjct: 447 SYAVSGFCLLFLMFFECIAISWAFGVNRFYDGIRDMIGYYPCCW 490
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 2.0
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 93 AYDLTNACVC-LMFCRCVHV*TQYQFFKMYLYFFFCILYYNLCW 221
+Y ++ C+ LMF C+ + + + Y I YY CW
Sbjct: 500 SYAVSGFCLLFLMFFECIAISWAFGVNRFYDGIRDMIGYYPCCW 543
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVV 272
Y N NN N KKL Y+I +
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 207 YNLCWNNKQTNKKKLLYSIRVV 272
YN NN N KKL Y+I +
Sbjct: 98 YNYNNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 207 YNLCWNNKQTNKKKLLYSIRVV 272
YN NN N KKL Y+I +
Sbjct: 98 YNYNNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 207 YNLCWNNKQTNKKKLLYSIRVV 272
YN NN N KKL Y+I +
Sbjct: 98 YNYNNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 207 YNLCWNNKQTNKKKLLYSIRVV 272
YN NN N KKL Y+I +
Sbjct: 98 YNYNNNNYNNNCKKLYYNINYI 119
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 207 YNLCWNNKQTNKKKLLYSIRVV 272
YN NN N KKL Y+I +
Sbjct: 337 YNNYNNNYNNNYKKLYYNINYI 358
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 3.4
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +3
Query: 213 LCWNNKQTNKKKLLYSIRVVVE 278
+ W K+T+ + Y++ +V+E
Sbjct: 292 IMWGTKETSTRTDAYTVEIVLE 313
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 207 YNLCWNNKQTNKKKLLYSI 263
YN NN N KKL Y+I
Sbjct: 338 YNNYNNNNYNNYKKLYYNI 356
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 204 YYNLCWNNKQTNKKKLLYSIRVVVESFL 287
+Y L WNN Q+N + + + + E+F+
Sbjct: 10 HYCLRWNNYQSNMTSVFHQL-LQTEAFV 36
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.5
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = +3
Query: 84 VVCAYDLTNACVCLMFCRCVHV*TQYQFFKMYLYFFFCILYYNLCWNNKQTNKKKLLY 257
VV D+ C+ L + + V + Q L+ Y L W K+ K+L+
Sbjct: 47 VVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLH 104
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.5
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = +3
Query: 84 VVCAYDLTNACVCLMFCRCVHV*TQYQFFKMYLYFFFCILYYNLCWNNKQTNKKKLLY 257
VV D+ C+ L + + V + Q L+ Y L W K+ K+L+
Sbjct: 47 VVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLH 104
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 222 NNKQTNKKKLLYSIRVV 272
NN N KKL Y+I +
Sbjct: 98 NNNYNNYKKLYYNINYI 114
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 222 NNKQTNKKKLLYSIRVV 272
NN N KKL Y+I +
Sbjct: 108 NNNYNNYKKLYYNINYI 124
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 433 HITFLIKILFFFNNQ 389
H FLI I+F ++N+
Sbjct: 11 HSIFLILIIFIYSNE 25
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 433 HITFLIKILFFFNNQ 389
H FLI I+F ++N+
Sbjct: 11 HSIFLILIIFIYSNE 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,503
Number of Sequences: 438
Number of extensions: 1979
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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