Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0620
         (645 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled recep...    33   0.87 
BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled recep...    33   0.87 
AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled recep...    33   0.87 
AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coup...    33   0.87 
AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane hel...    33   0.87 
BC100937-1|AAI00938.1|  301|Homo sapiens solute carrier family 2...    30   6.1  
BC131801-1|AAI31802.1|  567|Homo sapiens protein phosphatase 1, ...    30   8.1  
AL121889-2|CAM27345.1|  467|Homo sapiens protein phosphatase 1, ...    30   8.1  
AL121889-1|CAI19080.1|  567|Homo sapiens protein phosphatase 1, ...    30   8.1  
AL031657-2|CAM28212.1|  467|Homo sapiens protein phosphatase 1, ...    30   8.1  
AL031657-1|CAI20058.1|  567|Homo sapiens protein phosphatase 1, ...    30   8.1  
AF362910-1|AAK52796.1|  567|Homo sapiens CAAX box protein TIMAP ...    30   8.1  
AB177855-1|BAD66833.1|  467|Homo sapiens KIAA0823 splice variant...    30   8.1  
AB020630-1|BAA74846.2|  578|Homo sapiens KIAA0823 protein protein.     30   8.1  

>BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 33.1 bits (72), Expect = 0.87
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = -2

Query: 176 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALCLG 9
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C G
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAACRG 234


>BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 33.1 bits (72), Expect = 0.87
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = -2

Query: 176 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALCLG 9
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C G
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAACRG 234


>AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 33.1 bits (72), Expect = 0.87
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = -2

Query: 176 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALCLG 9
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C G
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAACRG 234


>AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 470

 Score = 33.1 bits (72), Expect = 0.87
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = -2

Query: 176 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALCLG 9
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C G
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAACRG 234


>AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 470

 Score = 33.1 bits (72), Expect = 0.87
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = -2

Query: 176 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALCLG 9
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C G
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAACRG 234


>BC100937-1|AAI00938.1|  301|Homo sapiens solute carrier family 25
           (mitochondrial carrier; ornithine transporter) member
           protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 272 ALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKD 403
           ALA  P    K +++ + +  ++ K    H T W+ VKC  +KD
Sbjct: 121 ALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKCILKKD 164


>BC131801-1|AAI31802.1|  567|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 276 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 334

Query: 264 RTS 272
           RTS
Sbjct: 335 RTS 337


>AL121889-2|CAM27345.1|  467|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 176 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 234

Query: 264 RTS 272
           RTS
Sbjct: 235 RTS 237


>AL121889-1|CAI19080.1|  567|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 276 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 334

Query: 264 RTS 272
           RTS
Sbjct: 335 RTS 337


>AL031657-2|CAM28212.1|  467|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 176 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 234

Query: 264 RTS 272
           RTS
Sbjct: 235 RTS 237


>AL031657-1|CAI20058.1|  567|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 276 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 334

Query: 264 RTS 272
           RTS
Sbjct: 335 RTS 337


>AF362910-1|AAK52796.1|  567|Homo sapiens CAAX box protein TIMAP
           protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 276 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 334

Query: 264 RTS 272
           RTS
Sbjct: 335 RTS 337


>AB177855-1|BAD66833.1|  467|Homo sapiens KIAA0823 splice variant 1
           protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 176 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 234

Query: 264 RTS 272
           RTS
Sbjct: 235 RTS 237


>AB020630-1|BAA74846.2|  578|Homo sapiens KIAA0823 protein protein.
          Length = 578

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 84  EQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNSR 263
           +  E L  H A   + T  DE  ++  +  +FK     LK +   +++KSQL  K   SR
Sbjct: 287 QMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELK-HKHDVIMKSQLRHKSSLSR 345

Query: 264 RTS 272
           RTS
Sbjct: 346 RTS 348


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,271,756
Number of Sequences: 237096
Number of extensions: 1875633
Number of successful extensions: 3908
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3908
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)