Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0618
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   5.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.5  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 252 MNASKQESWRNLAASFD 202
           ++ +KQ+ W+ L A +D
Sbjct: 88  LSHNKQQMWKELTAKYD 104


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 315 NTKRIVFHYLYSSL 274
           NTK  ++H+L+S L
Sbjct: 98  NTKSFIYHFLHSWL 111


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 315 NTKRIVFHYLYSSL 274
           NTK  ++H+L+S L
Sbjct: 98  NTKSFIYHFLHSWL 111


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 259 RKDECIEARKLAELSRLF*QFKN 191
           ++ + +  RKL EL R   +FKN
Sbjct: 594 KRKKSLPVRKLLELERAQHEFKN 616


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,943
Number of Sequences: 336
Number of extensions: 2412
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)