Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0612
(545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35093-1|CAA84476.1| 300|Homo sapiens SURF-1 protein. 87 5e-17
BC071658-1|AAH71658.1| 300|Homo sapiens surfeit 1 protein. 87 5e-17
BC028314-1|AAH28314.1| 300|Homo sapiens surfeit 1 protein. 87 5e-17
AL158826-12|CAI12837.1| 300|Homo sapiens surfeit 1 protein. 87 5e-17
AL158826-11|CAI12836.1| 270|Homo sapiens surfeit 1 protein. 87 5e-17
BC065555-1|AAH65555.1| 607|Homo sapiens translocase of outer mi... 29 8.0
BC052994-1|AAH52994.1| 608|Homo sapiens translocase of outer mi... 29 8.0
BC003633-1|AAH03633.1| 608|Homo sapiens translocase of outer mi... 29 8.0
AB018262-1|BAA34439.2| 624|Homo sapiens KIAA0719 protein protein. 29 8.0
>Z35093-1|CAA84476.1| 300|Homo sapiens SURF-1 protein.
Length = 300
Score = 86.6 bits (205), Expect = 5e-17
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = +1
Query: 241 KRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 420
K D +W+LL+IPVT+F LG+WQV R +WKL LI ++++ A P+ +P D EL+
Sbjct: 55 KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114
Query: 421 MEYXPVKXXXEFLHXXEILIGPRALIEXSLSPNRVGLLVS 540
+EY PVK F H E+ + PR +++ GL+ S
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISS 154
>BC071658-1|AAH71658.1| 300|Homo sapiens surfeit 1 protein.
Length = 300
Score = 86.6 bits (205), Expect = 5e-17
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = +1
Query: 241 KRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 420
K D +W+LL+IPVT+F LG+WQV R +WKL LI ++++ A P+ +P D EL+
Sbjct: 55 KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114
Query: 421 MEYXPVKXXXEFLHXXEILIGPRALIEXSLSPNRVGLLVS 540
+EY PVK F H E+ + PR +++ GL+ S
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISS 154
>BC028314-1|AAH28314.1| 300|Homo sapiens surfeit 1 protein.
Length = 300
Score = 86.6 bits (205), Expect = 5e-17
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = +1
Query: 241 KRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 420
K D +W+LL+IPVT+F LG+WQV R +WKL LI ++++ A P+ +P D EL+
Sbjct: 55 KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114
Query: 421 MEYXPVKXXXEFLHXXEILIGPRALIEXSLSPNRVGLLVS 540
+EY PVK F H E+ + PR +++ GL+ S
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISS 154
>AL158826-12|CAI12837.1| 300|Homo sapiens surfeit 1 protein.
Length = 300
Score = 86.6 bits (205), Expect = 5e-17
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = +1
Query: 241 KRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 420
K D +W+LL+IPVT+F LG+WQV R +WKL LI ++++ A P+ +P D EL+
Sbjct: 55 KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114
Query: 421 MEYXPVKXXXEFLHXXEILIGPRALIEXSLSPNRVGLLVS 540
+EY PVK F H E+ + PR +++ GL+ S
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISS 154
>AL158826-11|CAI12836.1| 270|Homo sapiens surfeit 1 protein.
Length = 270
Score = 86.6 bits (205), Expect = 5e-17
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = +1
Query: 241 KRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 420
K D +W+LL+IPVT+F LG+WQV R +WKL LI ++++ A P+ +P D EL+
Sbjct: 37 KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 96
Query: 421 MEYXPVKXXXEFLHXXEILIGPRALIEXSLSPNRVGLLVS 540
+EY PVK F H E+ + PR +++ GL+ S
Sbjct: 97 LEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISS 136
>BC065555-1|AAH65555.1| 607|Homo sapiens translocase of outer
mitochondrial membrane 70 homolog A (S. cerevisiae)
protein.
Length = 607
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 220 AITEGQKKRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPK 399
A+T+ Q+ + DE+Y + + P + T + + QWK L ++ S A+ ID
Sbjct: 484 ALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKC 543
Query: 400 DFS 408
DF+
Sbjct: 544 DFA 546
>BC052994-1|AAH52994.1| 608|Homo sapiens translocase of outer
mitochondrial membrane 70 homolog A (S. cerevisiae)
protein.
Length = 608
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 220 AITEGQKKRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPK 399
A+T+ Q+ + DE+Y + + P + T + + QWK L ++ S A+ ID
Sbjct: 485 ALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKC 544
Query: 400 DFS 408
DF+
Sbjct: 545 DFA 547
>BC003633-1|AAH03633.1| 608|Homo sapiens translocase of outer
mitochondrial membrane 70 homolog A (S. cerevisiae)
protein.
Length = 608
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 220 AITEGQKKRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPK 399
A+T+ Q+ + DE+Y + + P + T + + QWK L ++ S A+ ID
Sbjct: 485 ALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKC 544
Query: 400 DFS 408
DF+
Sbjct: 545 DFA 547
>AB018262-1|BAA34439.2| 624|Homo sapiens KIAA0719 protein protein.
Length = 624
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 220 AITEGQKKRRTDEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPK 399
A+T+ Q+ + DE+Y + + P + T + + QWK L ++ S A+ ID
Sbjct: 501 ALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKC 560
Query: 400 DFS 408
DF+
Sbjct: 561 DFA 563
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,780,210
Number of Sequences: 237096
Number of extensions: 1167231
Number of successful extensions: 1773
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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