Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0610
(485 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 101 1e-21
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 101 1e-21
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 101 1e-21
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 101 1e-21
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 101 1e-21
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 101 1e-21
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 101 1e-21
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 42 9e-04
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 42 9e-04
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 42 9e-04
CR457161-1|CAG33442.1| 599|Homo sapiens SCMH1 protein. 30 5.0
BC021252-1|AAH21252.1| 599|Homo sapiens SCMH1 protein protein. 30 5.0
BC009752-1|AAH09752.1| 660|Homo sapiens sex comb on midleg homo... 30 5.0
AL606484-1|CAH72242.1| 648|Homo sapiens sex comb on midleg homo... 30 5.0
AL391730-7|CAH72796.1| 577|Homo sapiens sex comb on midleg homo... 30 5.0
AL391730-6|CAH72795.1| 599|Homo sapiens sex comb on midleg homo... 30 5.0
AL391730-5|CAH72794.1| 648|Homo sapiens sex comb on midleg homo... 30 5.0
AL391730-4|CAH72793.1| 660|Homo sapiens sex comb on midleg homo... 30 5.0
AL391730-2|CAH72791.1| 591|Homo sapiens sex comb on midleg homo... 30 5.0
AL110502-5|CAI22112.1| 577|Homo sapiens sex comb on midleg homo... 30 5.0
AL110502-4|CAI22113.1| 599|Homo sapiens sex comb on midleg homo... 30 5.0
AL110502-3|CAI22111.1| 648|Homo sapiens sex comb on midleg homo... 30 5.0
AL110502-2|CAI22110.1| 660|Homo sapiens sex comb on midleg homo... 30 5.0
AL110502-1|CAI22109.1| 591|Homo sapiens sex comb on midleg homo... 30 5.0
AF149046-1|AAF01151.1| 577|Homo sapiens Sex comb on midleg homo... 30 5.0
AF149045-1|AAF01150.1| 591|Homo sapiens Sex comb on midleg homo... 30 5.0
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 101 bits (243), Expect = 1e-21
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQXYEYMTAYIEAA 425
HARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA YEYM AYIE A
Sbjct: 68 HARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 124
Score = 85.0 bits (201), Expect = 1e-16
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +1
Query: 58 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 237
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAA KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAANLGTKDHHYFKYCKISALA 61
Query: 238 LLKMVI 255
LLKMV+
Sbjct: 62 LLKMVM 67
Score = 34.7 bits (76), Expect = 0.17
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
ENAIGWYHSHPG
Sbjct: 131 ENAIGWYHSHPG 142
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 101 bits (243), Expect = 1e-21
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQXYEYMTAYIEAA 425
HARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA YEYM AYIE A
Sbjct: 68 HARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 124
Score = 96.3 bits (229), Expect = 5e-20
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +1
Query: 58 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 237
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 238 LLKMVI 255
LLKMV+
Sbjct: 62 LLKMVM 67
Score = 34.7 bits (76), Expect = 0.17
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
ENAIGWYHSHPG
Sbjct: 131 ENAIGWYHSHPG 142
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 101 bits (243), Expect = 1e-21
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQXYEYMTAYIEAA 425
HARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA YEYM AYIE A
Sbjct: 68 HARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 124
Score = 96.3 bits (229), Expect = 5e-20
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +1
Query: 58 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 237
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 238 LLKMVI 255
LLKMV+
Sbjct: 62 LLKMVM 67
Score = 34.7 bits (76), Expect = 0.17
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
ENAIGWYHSHPG
Sbjct: 131 ENAIGWYHSHPG 142
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 101 bits (243), Expect = 1e-21
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQXYEYMTAYIEAA 425
HARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA YEYM AYIE A
Sbjct: 68 HARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 124
Score = 96.3 bits (229), Expect = 5e-20
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +1
Query: 58 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 237
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 238 LLKMVI 255
LLKMV+
Sbjct: 62 LLKMVM 67
Score = 34.7 bits (76), Expect = 0.17
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
ENAIGWYHSHPG
Sbjct: 131 ENAIGWYHSHPG 142
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 101 bits (243), Expect = 1e-21
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQXYEYMTAYIEAA 425
HARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA YEYM AYIE A
Sbjct: 68 HARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 124
Score = 96.3 bits (229), Expect = 5e-20
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +1
Query: 58 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 237
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 238 LLKMVI 255
LLKMV+
Sbjct: 62 LLKMVM 67
Score = 34.7 bits (76), Expect = 0.17
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
ENAIGWYHSHPG
Sbjct: 131 ENAIGWYHSHPG 142
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 101 bits (243), Expect = 1e-21
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQXYEYMTAYIEAA 425
HARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA YEYM AYIE A
Sbjct: 68 HARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 124
Score = 96.3 bits (229), Expect = 5e-20
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +1
Query: 58 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 237
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 238 LLKMVI 255
LLKMV+
Sbjct: 62 LLKMVM 67
Score = 34.7 bits (76), Expect = 0.17
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
ENAIGWYHSHPG
Sbjct: 131 ENAIGWYHSHPG 142
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 101 bits (243), Expect = 1e-21
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQXYEYMTAYIEAA 425
HARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA YEYM AYIE A
Sbjct: 37 HARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 93
Score = 34.7 bits (76), Expect = 0.17
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
ENAIGWYHSHPG
Sbjct: 100 ENAIGWYHSHPG 111
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 202 HFFKDIKISALALLKMVI 255
H+FK KISALALLKMV+
Sbjct: 19 HYFKYCKISALALLKMVM 36
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 42.3 bits (95), Expect = 9e-04
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNA 380
H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 44 HGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA 86
Score = 29.5 bits (63), Expect = 6.6
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
E +GWYHSHPG
Sbjct: 106 EMVVGWYHSHPG 117
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 42.3 bits (95), Expect = 9e-04
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNA 380
H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 44 HGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA 86
Score = 29.5 bits (63), Expect = 6.6
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
E +GWYHSHPG
Sbjct: 106 EMVVGWYHSHPG 117
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 42.3 bits (95), Expect = 9e-04
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 HARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNA 380
H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 44 HGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA 86
Score = 29.5 bits (63), Expect = 6.6
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 449 ENAIGWYHSHPG 484
E +GWYHSHPG
Sbjct: 106 EMVVGWYHSHPG 117
>CR457161-1|CAG33442.1| 599|Homo sapiens SCMH1 protein.
Length = 599
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 244 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 294
>BC021252-1|AAH21252.1| 599|Homo sapiens SCMH1 protein protein.
Length = 599
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 244 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 294
>BC009752-1|AAH09752.1| 660|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 660
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 305 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 355
>AL606484-1|CAH72242.1| 648|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 648
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 315 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 365
>AL391730-7|CAH72796.1| 577|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 577
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 244 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 294
>AL391730-6|CAH72795.1| 599|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 599
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 244 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 294
>AL391730-5|CAH72794.1| 648|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 648
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 315 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 365
>AL391730-4|CAH72793.1| 660|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 660
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 305 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 355
>AL391730-2|CAH72791.1| 591|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 591
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 258 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 308
>AL110502-5|CAI22112.1| 577|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 577
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 244 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 294
>AL110502-4|CAI22113.1| 599|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 599
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 244 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 294
>AL110502-3|CAI22111.1| 648|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 648
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 315 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 365
>AL110502-2|CAI22110.1| 660|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 660
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 305 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 355
>AL110502-1|CAI22109.1| 591|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 591
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 258 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 308
>AF149046-1|AAF01151.1| 577|Homo sapiens Sex comb on midleg homolog
1 isoform 2 protein.
Length = 577
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 244 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 294
>AF149045-1|AAF01150.1| 591|Homo sapiens Sex comb on midleg homolog
1 isoform 1 protein.
Length = 591
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 376 FTRVSVPSTGSANESITIIVFASTLPSNS---PMTSSVPPDLA*SPSSAMQ 233
F + P GS + T++ P+ S P TS+VP D A PSSAMQ
Sbjct: 258 FPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQ 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,728,161
Number of Sequences: 237096
Number of extensions: 1724522
Number of successful extensions: 4983
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4982
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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