Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0599
         (569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9KBB4 Cluster: BH2014 protein; n=2; Bacillus haloduran...    35   1.2  
UniRef50_UPI00015B61C7 Cluster: PREDICTED: similar to CG12017-PA...    33   3.6  
UniRef50_Q3E9C1 Cluster: Uncharacterized protein At5g19330.2; n=...    33   6.2  
UniRef50_Q2H2V7 Cluster: Predicted protein; n=1; Chaetomium glob...    33   6.2  

>UniRef50_Q9KBB4 Cluster: BH2014 protein; n=2; Bacillus
           halodurans|Rep: BH2014 protein - Bacillus halodurans
          Length = 1816

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = +1

Query: 31  IKIKFLAIFDRRVYVISMESSEVAKEEVVQETGDLNGAKAGPDTDREAGESSGVLIQLEE 210
           + + FL   + R  V+     E A+EEV +ET + +  +   +T  E  ES    +  EE
Sbjct: 155 LSLTFLLHGESRTIVVPFTVEEEAEEEVAEETTEESTEELTEETSEETSESESEPVTEEE 214

Query: 211 EAQDD 225
            A+D+
Sbjct: 215 GAEDE 219


>UniRef50_UPI00015B61C7 Cluster: PREDICTED: similar to CG12017-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG12017-PA - Nasonia vitripennis
          Length = 216

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
 Frame = +1

Query: 28  CIKIKFLAIFDRRVYVISMESSEVAKEEVVQETGDL--NGAKA--GPDTDREAGESSGVL 195
           C + +  A  DR    ++  +SEV   +V++E+G L  +G +A  GP+ D  A E  G  
Sbjct: 42  CARQRMAAEIDRIELQVTGRASEVPMSKVIEESGSLLADGIQAIFGPEDDEGAAEDDGAA 101

Query: 196 IQ 201
           ++
Sbjct: 102 VE 103


>UniRef50_Q3E9C1 Cluster: Uncharacterized protein At5g19330.2; n=1;
           Arabidopsis thaliana|Rep: Uncharacterized protein
           At5g19330.2 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 636

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 49  AIFDRRVYVISMESSEVAKEEVVQETGDLNGAKAGPDTDREAGE-SSGVLIQLEEEAQD 222
           A+ DR +  +S +  +    EV  +   LN A +  ++DR A + ++ VL +L + A+D
Sbjct: 29  AVEDREISAVSTDGGQALLSEVAAQVSVLNSAFSWQESDRAAAKRATQVLAELAKNAED 87


>UniRef50_Q2H2V7 Cluster: Predicted protein; n=1; Chaetomium
            globosum|Rep: Predicted protein - Chaetomium globosum
            (Soil fungus)
          Length = 1284

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 103  KEEVVQETGDLNGAKAGPDTDREAGESSGVLIQ 201
            K E  ++T D N + + P+TD E G  +GV++Q
Sbjct: 1083 KLETTKDTDDTNTSNSQPETDGETGTGAGVILQ 1115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,531,039
Number of Sequences: 1657284
Number of extensions: 6884328
Number of successful extensions: 19059
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19040
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)