Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0596
(408 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 144 8e-34
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 139 2e-32
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 137 9e-32
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 132 2e-30
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 122 3e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 113 1e-24
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 111 7e-24
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 100 1e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 97 1e-19
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 90 1e-17
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 86 2e-16
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 83 2e-15
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 81 1e-14
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 74 1e-12
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 58 7e-08
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 52 6e-06
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 48 1e-04
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 42 0.004
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 41 0.008
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 40 0.019
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 40 0.025
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 40 0.025
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.025
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 37 0.14
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 36 0.42
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 34 0.96
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 33 2.2
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 2.2
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 33 2.9
UniRef50_UPI0000D639CE Cluster: testis expressed gene 21; n=1; M... 32 3.9
UniRef50_Q9R0U9 Cluster: Tsec-2; n=14; Theria|Rep: Tsec-2 - Mus ... 32 3.9
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 32 3.9
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 32 3.9
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 32 3.9
UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely ort... 32 5.1
UniRef50_O94823 Cluster: Probable phospholipid-transporting ATPa... 32 5.1
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 31 6.8
UniRef50_Q60YJ4 Cluster: Putative uncharacterized protein CBG182... 31 6.8
UniRef50_Q5K958 Cluster: Prenyl-dependent CAAX protease, putativ... 31 6.8
UniRef50_Q9WU42 Cluster: Nuclear receptor corepressor 2; n=15; A... 31 6.8
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 31 8.9
UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4; P... 31 8.9
UniRef50_Q5KUB4 Cluster: Phosphate ABC transporter; n=1; Geobaci... 31 8.9
UniRef50_A0VJS7 Cluster: Transcriptional regulator, LysR family;... 31 8.9
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 144 bits (348), Expect = 8e-34
Identities = 65/76 (85%), Positives = 69/76 (90%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MKLNVSYPATGCQKLFEV DEHKLR+FYEKRMG VEAD LGDEWKGY LR+ GGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 207 FPMKQGVLTNSRVRLL 254
FPMKQGVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 35.1 bits (77), Expect = 0.55
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Frame = +2
Query: 185 WRQRQARIP---DETGRPDKQPXSSS-----VSKGHSCYRPRRDGERKRKSVXGCIVDAN 340
W+ Q RI D+ G P KQ + + K HSC+ PR + RK K+V V+AN
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEAN 104
Query: 341 LSVLAL 358
+S L L
Sbjct: 105 VSALTL 110
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 139 bits (337), Expect = 2e-32
Identities = 69/121 (57%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MKLNVS+PATG QK FEV D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++ GGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 207 FPMKQGVLTNSRVRLLCQRATHVTDRAAMERENVNQXVDVLLTPISRSWL-FVIVRXGAQ 383
FPMKQGVLTN+RVRLL ++ H R E + V + + S L ++V+ G +
Sbjct: 61 FPMKQGVLTNTRVRLLLKKG-HSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEK 119
Query: 384 E 386
+
Sbjct: 120 D 120
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 137 bits (331), Expect = 9e-32
Identities = 70/121 (57%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R+ GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 207 FPMKQGVLTNSRVRLLCQRATHVTDRAAMERENVNQXVDVLLTPISRSWL-FVIVRXGAQ 383
FPMKQGVLT+ RVRLL + H R E + V + + S L VIV+ G +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEK 119
Query: 384 E 386
+
Sbjct: 120 D 120
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 132 bits (320), Expect = 2e-30
Identities = 66/121 (54%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 207 FPMKQGVLTNSRVRLLCQRATHVTDRAAMERENVNQXVDVLLTPISRSWL-FVIVRXGAQ 383
FPMKQG++TN RVRLL + H R E + V + S L VIV+ G Q
Sbjct: 61 FPMKQGIMTNGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQ 119
Query: 384 E 386
+
Sbjct: 120 D 120
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 122 bits (294), Expect = 3e-27
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R+ GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 207 FPMKQGVLTNSRVRLL 254
FPMKQ VLT+ R+ LL
Sbjct: 61 FPMKQDVLTHDRIHLL 76
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 113 bits (272), Expect = 1e-24
Identities = 49/79 (62%), Positives = 62/79 (78%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 207 FPMKQGVLTNSRVRLLCQR 263
FPM+QGVL RVR+L ++
Sbjct: 61 FPMRQGVLFKGRVRILMRK 79
Score = 51.6 bits (118), Expect = 6e-06
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +2
Query: 260 KGHSCYRPRRDGERKRKSVXGCIVDANLSVLAL 358
KGH YRPR+DGE KRKS+ GCIV ++ VLAL
Sbjct: 79 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLAL 111
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 111 bits (266), Expect = 7e-24
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++ GGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 207 FPMKQGVLTNSRVRLL 254
FPMKQGV+ RVRLL
Sbjct: 61 FPMKQGVMVRGRVRLL 76
Score = 49.6 bits (113), Expect = 2e-05
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 254 VSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLAL 358
+S+GHSC+ RR G RKRKSV GCIV ++ VLAL
Sbjct: 77 LSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLAL 111
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 100 bits (240), Expect = 1e-20
Identities = 47/79 (59%), Positives = 57/79 (72%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 207 FPMKQGVLTNSRVRLLCQR 263
FPM QGVLTN+RVRLL ++
Sbjct: 102 FPMMQGVLTNNRVRLLFKK 120
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +2
Query: 260 KGHSCYRPRRDGERKRKSVXGCIVDANLSVLALCYCAXG 376
KG CYRPR+ GE++RKSV GCIV +LS L L G
Sbjct: 120 KGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKG 158
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 97.1 bits (231), Expect = 1e-19
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +3
Query: 30 KLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQGF 209
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 210 PMKQGVLTNSRVRLL 254
PM GV TN+RVRLL
Sbjct: 61 PMMTGVATNNRVRLL 75
Score = 39.9 bits (89), Expect = 0.019
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +2
Query: 266 HSCYRPRRDGERKRKSVXGCIVDANLSVL 352
+ CY+P R+GER+RK+V G IV ++SVL
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVL 108
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 90.2 bits (214), Expect = 1e-17
Identities = 37/76 (48%), Positives = 55/76 (72%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 207 FPMKQGVLTNSRVRLL 254
FPMKQGV+T R+RLL
Sbjct: 61 FPMKQGVITPRRIRLL 76
Score = 50.0 bits (114), Expect = 2e-05
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 263 GHSCYRPRRDGERKRKSVXGCIVDANLSVL 352
G SCYRPR+DGERKRK+V GCI+ +S L
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISAL 109
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 86.2 bits (204), Expect = 2e-16
Identities = 35/81 (43%), Positives = 56/81 (69%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 207 FPMKQGVLTNSRVRLLCQRAT 269
FPMK+G+L+ SRV++L ++ +
Sbjct: 61 FPMKEGILSPSRVKILLKKGS 81
Score = 31.5 bits (68), Expect = 6.8
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 257 SKGHSCYRPRRDGERKRKSVXGCIVDANLSVL 352
S G Y+ ++ GER RKSV GCIV +SVL
Sbjct: 81 STGCRGYKMKK-GERCRKSVRGCIVSPEISVL 111
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 83.0 bits (196), Expect = 2e-15
Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQ 203
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 204 GFPMKQGVLTNSRVRLLCQR 263
GFPM GVL +SRV LL +R
Sbjct: 61 GFPMVPGVLASSRVSLLVKR 80
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 80.6 bits (190), Expect = 1e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWK 164
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 73.7 bits (173), Expect = 1e-12
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +3
Query: 30 KLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQGF 209
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 210 PMKQGVLTNSRVRLLCQR 263
PM QGVL + R RLL ++
Sbjct: 68 PMYQGVLKSQRARLLLRQ 85
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 260 KGHSCYRPRRDGERKRKSVXGCIVDANLSVLAL 358
+G CY RR+GERKRKS+ GCIV +L L++
Sbjct: 85 QGAKCYLHRRNGERKRKSIRGCIVGPDLHALSV 117
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 58.0 bits (134), Expect = 7e-08
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = +3
Query: 69 LFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQGFPMKQGVLTNSRVR 248
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 249 LLCQR 263
L +
Sbjct: 60 PLLSK 64
Score = 39.1 bits (87), Expect = 0.034
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +2
Query: 209 PDETGRPDKQPXSSSVSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLALCYCAXG 376
P +G K+ +SKG + YR RR G R+RKSV G IV + VL L G
Sbjct: 47 PMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPG 102
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 51.6 bits (118), Expect = 6e-06
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +2
Query: 260 KGHSCYRPRRDGERKRKSVXGCIVDANLSVLAL 358
KGH YRPR+DGE KRKS+ GCIV ++ VLAL
Sbjct: 84 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLAL 116
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 47.6 bits (108), Expect = 1e-04
Identities = 27/96 (28%), Positives = 54/96 (56%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 207 FPMKQGVLTNSRVRLLCQRATHVTDRAAMERENVNQ 314
F +K+ + T R+++ ++ + + +R+ +R+N+ +
Sbjct: 60 FLLKKNLNTFERLKINVKKGS-LGNRSHFKRKNLTK 94
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 42.3 bits (95), Expect = 0.004
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 21 AVMKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 173
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 174 LRVXGGNDKQGFPMKQGVLTNSRVRLLCQRATHVTDRAAMER 299
L++ GG DK GFPM+ V RV++L R R ER
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRERGER 102
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 41.1 bits (92), Expect = 0.008
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +3
Query: 117 RMGAEVEADQLGDEWKGYVLRVXGGNDKQGFPMKQGVLTNSRVRLLCQRAT 269
++G E LG KGY LR+ GG+DK GFPMK+ V R + L T
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 39.9 bits (89), Expect = 0.019
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = +3
Query: 21 AVMKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 173
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 174 LRVXGGNDKQGFPMKQGVLTNSRVRLLCQRATHVTDRAAMER 299
L + GG DK GFPM+ + RVR+L + + ER
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKEKGER 102
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 39.5 bits (88), Expect = 0.025
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 66 KLFEVXDE-HKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVXGGNDKQGFPMKQGV 227
K F++ E R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDI 188
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 39.5 bits (88), Expect = 0.025
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +3
Query: 30 KLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQGF 209
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 210 PMKQGVLTNSRVRLLCQRATHVTDRAAMERE-NVNQXVDVLLTPISRSWLFVIV 368
MKQ VL + RV LL + RE N D + PIS + +I+
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDAVKLPISLLNMVIII 104
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.025
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 21 AVMKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDK 200
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 201 QGFPMKQGV 227
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 37.1 bits (82), Expect = 0.14
Identities = 26/96 (27%), Positives = 46/96 (47%)
Frame = +3
Query: 21 AVMKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDK 200
A ++ V+ P +G FEV + R F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEVDGQDANR-FIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 201 QGFPMKQGVLTNSRVRLLCQRATHVTDRAAMERENV 308
G PM++ V + + +L + ER+ V
Sbjct: 59 AGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRV 94
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 35.5 bits (78), Expect = 0.42
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 120 MGAEVEADQLGDEWKGYVLRVXGGNDKQGFPMKQGVLTNSRVRLLCQRATHVTD 281
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L R + D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 34.3 bits (75), Expect = 0.96
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 39 VSYPATG--CQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQGFP 212
+S P TG QK+ E + ++L K++G +V + + D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 213 MKQGVLTNSRVRLL 254
M+ + +R RLL
Sbjct: 63 MRPDLPGTARRRLL 76
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 33.1 bits (72), Expect = 2.2
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 254 VSKGHSCYRPRRDGERKRKSVXGCIVDANLSVLAL 358
+ K HSC+ PR + RK K+V V+AN+S L L
Sbjct: 23 LKKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTL 57
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.1 bits (72), Expect = 2.2
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 30 KLNVSYPAT-GCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVXGGNDKQG 206
KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 207 FPMKQGVL 230
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 32.7 bits (71), Expect = 2.9
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 114 KRMGAEVEADQLGDEWKGYVLRVXGGNDKQGFPMKQGVLTNSRVRLL 254
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVL 72
>UniRef50_UPI0000D639CE Cluster: testis expressed gene 21; n=1; Mus
musculus|Rep: testis expressed gene 21 - Mus musculus
Length = 544
Score = 32.3 bits (70), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 305 VFSLHRGAVCNMSGPLTQKTNXAVCQDALFHRESL 201
V++L RG+V GP+ +T CQ L H+E L
Sbjct: 223 VYNLKRGSVVYSEGPIDGQTTGDKCQQDLIHQEKL 257
>UniRef50_Q9R0U9 Cluster: Tsec-2; n=14; Theria|Rep: Tsec-2 - Mus
musculus (Mouse)
Length = 575
Score = 32.3 bits (70), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 305 VFSLHRGAVCNMSGPLTQKTNXAVCQDALFHRESL 201
V++L RG+V GP+ +T CQ L H+E L
Sbjct: 223 VYNLKRGSVVYSEGPIDGQTTGDKCQQDLIHQEKL 257
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 32.3 bits (70), Expect = 3.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 27 MKLNVSYPATGCQKLFEVXDEHKLRIFYEKRMGAEVEADQL 149
M + ++YPA+ QKL ++ +H++ Y+ E+ AD L
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 32.3 bits (70), Expect = 3.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 158 MEGLCTSCRWRQRQARIPDETGRPDKQPXSSSVSKGHSC 274
+ G C +CR R+ + +P + GRP+ +S GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPN---CGRCISSGHTC 41
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 32.3 bits (70), Expect = 3.9
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 114 KRMGAEVEADQLGDEWKGYVLRVXGGNDKQGFPMKQGVLTNSRVRLL 254
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLL 76
>UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely
ortholog of H. sapiens myosin XVB (MYO15B); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
likely ortholog of H. sapiens myosin XVB (MYO15B) -
Ornithorhynchus anatinus
Length = 1593
Score = 31.9 bits (69), Expect = 5.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 105 FYEKRMGAEVEADQLGDEWKGYVLRVXG 188
F E+R AEVE+ G++W G+VL+ G
Sbjct: 876 FTEERYSAEVESWTTGEQWAGWVLQTRG 903
>UniRef50_O94823 Cluster: Probable phospholipid-transporting ATPase
VB; n=8; Tetrapoda|Rep: Probable
phospholipid-transporting ATPase VB - Homo sapiens
(Human)
Length = 1461
Score = 31.9 bits (69), Expect = 5.1
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +2
Query: 176 SCRWRQRQARIPDETGRPDKQPXSSSVSKGHSCYRPRRDGERKRKSV 316
S R RQR A +P E RP P SS + S P+ KRK V
Sbjct: 1348 SWRSRQRPAPVP-EVARPTHHPVSSITGQDFSASTPKSSNPPKRKHV 1393
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 31.5 bits (68), Expect = 6.8
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2
Query: 254 QKTNXAVCQDALFHRESLLVVAAXDTKYIALPFI 153
++ + V Q AL H E+LLVV D + ++LPF+
Sbjct: 178 EQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q60YJ4 Cluster: Putative uncharacterized protein CBG18216;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG18216 - Caenorhabditis
briggsae
Length = 706
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 182 RWRQRQARIPDETGRPDKQPXSSSVSKG---HSCYRPRRD 292
++ + Q+ +PDE G+PD +P S+ + G + Y P D
Sbjct: 130 KFLETQSHMPDELGQPDDEPTSTEIKTGENRENSYSPELD 169
>UniRef50_Q5K958 Cluster: Prenyl-dependent CAAX protease, putative;
n=2; Filobasidiella neoformans|Rep: Prenyl-dependent
CAAX protease, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 445
Score = 31.5 bits (68), Expect = 6.8
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 167 LCTSCRWRQRQARIPDETGRPDK-QPXSSSVSKGHSCYRPRRDGERKRKSVXGCIVDANL 343
+CT RW+ +P+E P P SSS S H+C G R+ + + +
Sbjct: 20 VCTGDRWKTYYFYVPNEHFIPQSIPPPSSSFSNNHACVH-HEGGHRRAEYHQAHLGETEP 78
Query: 344 SVLALC 361
VL+ C
Sbjct: 79 IVLSCC 84
>UniRef50_Q9WU42 Cluster: Nuclear receptor corepressor 2; n=15;
Amniota|Rep: Nuclear receptor corepressor 2 - Mus
musculus (Mouse)
Length = 2472
Score = 31.5 bits (68), Expect = 6.8
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = -1
Query: 249 DEXGCLSGRPVSSGILAC---RCRXRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPP 79
D G L +P G++A R HE+ + R + PL RP K P
Sbjct: 1370 DPLGPLKLKPTHEGVVATVKEAGRSIHEIPREELRRTPELPLAPRPL---KEGSITQGTP 1426
Query: 78 LRTTSGIPLPGTKR 37
L+ SG P GTK+
Sbjct: 1427 LKYDSGAPSTGTKK 1440
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 31.1 bits (67), Expect = 8.9
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 231 SGRPVSSGILACRC-RXRHEVHSPSIHRLTDQPL 133
SGRPV+SGILA C + +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4;
Proteobacteria|Rep: Selenium-binding family protein -
Methylococcus capsulatus
Length = 459
Score = 31.1 bits (67), Expect = 8.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 57 GCQKLFEVXDEHKLRIFYEKRMGAEVEADQLGDEWKG----YVLRVXGGNDKQG 206
G +LF++ D H R YEK +GA+V + + W G Y + DK+G
Sbjct: 348 GKTRLFDISDPHHPRQVYEKTIGAQV--NMVSSSWDGQRLYYTSSLLANWDKKG 399
>UniRef50_Q5KUB4 Cluster: Phosphate ABC transporter; n=1;
Geobacillus kaustophilus|Rep: Phosphate ABC transporter
- Geobacillus kaustophilus
Length = 311
Score = 31.1 bits (67), Expect = 8.9
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = -1
Query: 234 LSGRPVSSGILACRCRXRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 55
L+G PV GILA + P+I R+TD L P +R+ A + S I
Sbjct: 156 LTGAPVGDGILAAAIVLSMMI-LPTITRITDDALCAVPNEWREANYALGGTKIEMISKIL 214
Query: 54 LPGTK 40
LP K
Sbjct: 215 LPAAK 219
>UniRef50_A0VJS7 Cluster: Transcriptional regulator, LysR family;
n=1; Delftia acidovorans SPH-1|Rep: Transcriptional
regulator, LysR family - Delftia acidovorans SPH-1
Length = 295
Score = 31.1 bits (67), Expect = 8.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 207 FPMKQGVLTNSRVRLLCQRATHVTDRAAMERENVNQXVDVLLTPISRSWLFVIVRXG 377
+P+ VLT S R +C + A + R V Q D+ +TP+ + L ++ G
Sbjct: 117 YPLIDLVLTESTTREICAQVASGDFDAGLLRYPVTQATDLSITPVEKDELVAVLPEG 173
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,977,779
Number of Sequences: 1657284
Number of extensions: 6837481
Number of successful extensions: 18957
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 18537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18941
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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