Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0596
         (408 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    26   0.61 
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   1.4  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   1.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   2.5  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    23   3.2  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   4.3  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    23   4.3  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   7.5  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    22   9.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    22   9.9  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 25.8 bits (54), Expect = 0.61
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +2

Query: 182  RWRQRQARIPDETGRPDKQPXSSSVSKGHSCYRPRRDGERKRK 310
            R  QRQAR       PD+Q    +VS      R RR+ ER R+
Sbjct: 1162 RQAQRQARAHM---LPDRQQNGRAVSSAEELERRRREMERTRR 1201


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 141 QPLLRRPCAFRKRYEACAR 85
           Q  +RR CAF K++EA  R
Sbjct: 379 QAHIRRHCAFAKQFEALCR 397


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 141 QPLLRRPCAFRKRYEACAR 85
           Q  +RR CAF K++EA  R
Sbjct: 410 QAHIRRHCAFAKQFEALCR 428


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 44   VPGNGMPEVVRSGGRAQA 97
            VPG+G+P    SGG   A
Sbjct: 3225 VPGSGLPAAAASGGAPSA 3242


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 217 FIGNPCLSLPPXTRS 173
           F GNPCL  PP  ++
Sbjct: 55  FAGNPCLKGPPVPKN 69


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 318 VDVLLTPISRSWLFVIVRXGAQEXYWI 398
           VD L++     + FV+   G ++ YW+
Sbjct: 321 VDTLVSTSGERYDFVLEANGVKDTYWV 347


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 272 MSGPLTQKTNXAVCQDALFHRESLLVV 192
           +S P  ++    +CQ  + HRES  VV
Sbjct: 31  VSEPSVEQFFLQLCQSTVLHRESYQVV 57


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 167 LCTSCRWRQRQA 202
           +CTSC WR  +A
Sbjct: 1   MCTSCAWRCARA 12


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -1

Query: 183 RHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 55
           + ++HS  +   +     RRP        + + P L TTSG P
Sbjct: 27  QQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP 69


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -1

Query: 183 RHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 55
           + ++HS  +   +     RRP        + + P L TTSG P
Sbjct: 27  QQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,562
Number of Sequences: 2352
Number of extensions: 7281
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)