Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0595
(331 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 25 0.16
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 1.4
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 22 1.9
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 2.5
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 3.3
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 3.3
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 3.3
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 20 5.8
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 20 7.7
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 20 7.7
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 20 7.7
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 20 7.7
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 25.4 bits (53), Expect = 0.16
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 222 SXSTGQPTAASMSFG-VSANPKS*STRRXGQW 130
S STGQ A+ SFG V++ P S S+ GQ+
Sbjct: 45 SISTGQRLPANFSFGQVNSPPSSTSSGSLGQF 76
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 22.2 bits (45), Expect = 1.4
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 54 PYLFKYNQICLFYHSCWVTGP 116
PY ++Y Q YH GP
Sbjct: 40 PYYYQYLQNAALYHKLQFRGP 60
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.8 bits (44), Expect = 1.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 225 SSXSTGQPTAASMSFGVSAN 166
S+ ST PT AS ++ SAN
Sbjct: 196 STGSTSSPTIASATYTNSAN 215
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.4 bits (43), Expect = 2.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 35 NFSLRFTIPIQIQPNMSLLPFVLGDW 112
N SL IPI + + + F+ G W
Sbjct: 282 NMSLLTVIPIHVWTSKEKISFLRGFW 307
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 3.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 217 EHWTADGSQHVVRG*RQSKILINKTXG 137
E+W +DG+Q + G R +K + T G
Sbjct: 401 ENWWSDGNQQIAFG-RGNKGFVAFTIG 426
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.0 bits (42), Expect = 3.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 217 EHWTADGSQHVVRG*RQSKILINKTXG 137
E+W +DG+Q + G R +K + T G
Sbjct: 402 ENWWSDGNQQIAFG-RGNKGFVAFTIG 427
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 3.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 217 EHWTADGSQHVVRG*RQSKILINKTXG 137
E+W +DG+Q + G R +K + T G
Sbjct: 402 ENWWSDGNQQIAFG-RGNKGFVAFTIG 427
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 20.2 bits (40), Expect = 5.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 83 SLLPFVLGDWPRVRHNHWPXRLVDQDFGLALT 178
S+LP + P+ NH L D D L +T
Sbjct: 27 SILPETALEAPKSPENHPETELSDSDCDLDVT 58
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 19.8 bits (39), Expect = 7.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 54 PYLFKYNQICLFYHSCW 104
P + +N+IC FY S W
Sbjct: 279 PGVLGFNEICSFY-SDW 294
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 19.8 bits (39), Expect = 7.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 84 LFYHSCWVTGPAFVTTT 134
+FY ++G F+TTT
Sbjct: 231 VFYSKIIISGSIFMTTT 247
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 19.8 bits (39), Expect = 7.7
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +3
Query: 90 YHSCWVTGPAF 122
YH W++G +F
Sbjct: 375 YHDIWMSGESF 385
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 19.8 bits (39), Expect = 7.7
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +3
Query: 90 YHSCWVTGPAF 122
YH W++G +F
Sbjct: 375 YHDIWMSGESF 385
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,856
Number of Sequences: 336
Number of extensions: 1354
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6367260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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