Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0595
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    24   1.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   5.2  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    21   9.1  
AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    21   9.1  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 265 DLGXXIXADKXKXQVNLDVQ 324
           D G  +   K K Q+NLDVQ
Sbjct: 3   DSGSAVNISKDKFQINLDVQ 22


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 198 AASMSFGVSANPKS*STRRXGQWL*RTRG 112
           A   S G  A PK+   +  G W   TRG
Sbjct: 142 AGFRSLGSGAPPKAQGGKHVGNWEQHTRG 170


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 207 VQCSXKTTSDHGDNXRC 257
           +QCS     D GD+ RC
Sbjct: 92  LQCSSLRDDDIGDDMRC 108


>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 132 WL*RTRGQSPNTNGRR 85
           W  R RGQ   T GRR
Sbjct: 21  WGLRVRGQHTKTTGRR 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,392
Number of Sequences: 2352
Number of extensions: 5601
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)