Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0595
         (331 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024989-1|ABE01219.1|  323|Drosophila melanogaster IP10750p pro...    29   1.9  
AE013599-1346|AAF58620.1|  323|Drosophila melanogaster CG13192-P...    29   1.9  
AY117427-1|AAR12637.1|  201|Drosophila melanogaster short neurop...    27   5.7  

>BT024989-1|ABE01219.1|  323|Drosophila melanogaster IP10750p
           protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 68  IQPNMSLLPFVLGDWPRVRHNHWPXRLVDQDFGLALT 178
           +Q N S L F +G  P    +H P RLV Q+ G  +T
Sbjct: 45  LQTNRSALHFEVGSDPITSLHHTPDRLVTQEKGGTIT 81


>AE013599-1346|AAF58620.1|  323|Drosophila melanogaster CG13192-PA
           protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 68  IQPNMSLLPFVLGDWPRVRHNHWPXRLVDQDFGLALT 178
           +Q N S L F +G  P    +H P RLV Q+ G  +T
Sbjct: 45  LQTNRSALHFEVGSDPITSLHHTPDRLVTQEKGGTIT 81


>AY117427-1|AAR12637.1|  201|Drosophila melanogaster short
           neuropeptide F precursor protein.
          Length = 201

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 162 LDWR*PRTTCWLPSAVQCSXKTTSDHGD 245
           L+W   RT  W+P+   C+ +    H D
Sbjct: 155 LNWVPSRTPIWVPTTTDCTSEWCGSHND 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,243,666
Number of Sequences: 53049
Number of extensions: 226562
Number of successful extensions: 411
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)