Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0590
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   6.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.0  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   7.9  

>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -2

Query: 285 ERGC---TASDPVQNELQNSFSLQLLA*GTMPLLPSAHGLPWI 166
           ERG    +   PV++ +   F  + L  G      SAHG+ WI
Sbjct: 299 ERGAFYVSGQPPVRSSVNMMFLTKELRNGNTRTDDSAHGMTWI 341


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 383 LVGLNGCGKSSXLAXL 430
           LVG NG GKS+ LA +
Sbjct: 112 LVGKNGSGKSAILAAM 127


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 408 FPHPLSPTSPYLRP 367
           F +PLSP SP  RP
Sbjct: 26  FANPLSPNSPAERP 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,152
Number of Sequences: 2352
Number of extensions: 8135
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)