Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0585
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p pro...    29   3.1  
AY075164-1|AAL68034.1|  206|Drosophila melanogaster AT05466p pro...    27   9.4  
AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.       27   9.4  
AF127924-1|AAD26359.2|  397|Drosophila melanogaster odorant rece...    27   9.4  
AE014134-268|AAF51363.1|  397|Drosophila melanogaster CG4231-PA ...    27   9.4  

>BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p
           protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 121 STDRNVRSKCRCSNVSCSSHYDAQLTA 41
           S + N+ + C C+N+SCSS     +T+
Sbjct: 87  SNNSNIVTNCSCNNISCSSSNTQPITS 113


>AY075164-1|AAL68034.1|  206|Drosophila melanogaster AT05466p
           protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 178 CD*CFLCSRPSDRSGPGCVSTDRN-VRSKCRCSNV 77
           CD  +  S P + S P CV +D N V S   C++V
Sbjct: 25  CDPVWSSSSPRNTSDPWCVESDSNTVESLSGCASV 59


>AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.
          Length = 1685

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 125  CLHGPQCAFEMSMFKCVLQFTL 60
            C +G QC    S FKCVLQ +L
Sbjct: 1264 CRNGAQCKEFWSSFKCVLQQSL 1285


>AF127924-1|AAD26359.2|  397|Drosophila melanogaster odorant
           receptor DOR67 protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = +3

Query: 99  ERTLRSVETHPGPLLSEGRLHKKH*SHCVARAALVIRRVDAFRVTRSYSSLRLFYLIKI* 278
           ++ LR++ + PG    E   + K  + CV    L++  VDA R   S +    F LI I 
Sbjct: 223 KQRLRNLRSEPGRTEDE---YLKELADCVRDHRLILDYVDALRSVFSGTIFVQFLLIGIV 279

Query: 279 PKTTITNRVSLARLSDGSKNVLLL 350
              ++ N +  + LS G   VL +
Sbjct: 280 LGLSMINIMFFSTLSTGVAVVLFM 303


>AE014134-268|AAF51363.1|  397|Drosophila melanogaster CG4231-PA
           protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = +3

Query: 99  ERTLRSVETHPGPLLSEGRLHKKH*SHCVARAALVIRRVDAFRVTRSYSSLRLFYLIKI* 278
           ++ LR++ + PG    E   + K  + CV    L++  VDA R   S +    F LI I 
Sbjct: 223 KQRLRNLRSEPGRTEDE---YLKELADCVRDHRLILDYVDALRSVFSGTIFVQFLLIGIV 279

Query: 279 PKTTITNRVSLARLSDGSKNVLLL 350
              ++ N +  + LS G   VL +
Sbjct: 280 LGLSMINIMFFSTLSTGVAVVLFM 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,876,029
Number of Sequences: 53049
Number of extensions: 306930
Number of successful extensions: 688
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)