Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0582
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    25   1.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   9.0  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 14/66 (21%), Positives = 27/66 (40%)
 Frame = +2

Query: 260 WCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXEL 439
           WCG CK + P+              + + KVD  E  +    Q+++    T    +  E+
Sbjct: 31  WCGPCKVIAPK---LEEFQNKYADKIVVVKVDVDE-CEELAAQYNIASMPTFLFIKRKEV 86

Query: 440 XSEYNG 457
             +++G
Sbjct: 87  VGQFSG 92


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 464  ESNGIVKYMPCPSWTSFXELLTVXDSEA 547
            + NG +K    PSW S  E L      A
Sbjct: 961  DDNGAIKQNEFPSWASNKEYLAYNSPSA 988


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,601
Number of Sequences: 2352
Number of extensions: 10654
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)