Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0582
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 96 2e-20
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 96 2e-20
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 85 2e-17
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 69 2e-12
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 69 2e-12
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 66 1e-11
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 64 6e-11
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 64 6e-11
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 58 4e-09
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 54 6e-08
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 51 6e-07
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 49 2e-06
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 48 6e-06
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 43 1e-04
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 43 2e-04
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 43 2e-04
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 43 2e-04
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 43 2e-04
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 42 3e-04
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 37 0.010
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 36 0.014
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 33 0.098
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 33 0.17
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 32 0.30
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 31 0.39
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 31 0.39
At1g08430.1 68414.m00932 expressed protein contains Pfam profile... 31 0.69
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 30 1.2
At1g01020.1 68414.m00002 transmembrane ARV1-like family protein ... 30 1.2
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 29 2.8
At1g08440.1 68414.m00933 hypothetical protein contains Pfam prof... 28 4.9
At3g43270.1 68416.m04567 pectinesterase family protein contains ... 27 6.4
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 27 8.5
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCT-EGGKSTCEQFSVXGYSTLKIFR-X 430
PWCGHCK+L PEY AA L ++VPPV LAK+D + E + Q+ V G+ T+KIFR
Sbjct: 57 PWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNG 116
Query: 431 XELXSEYNGPRESNGIVKYMPCPSWTSFXELLTVXDSEAFTS 556
+ EYNGPRE+ GIV Y+ S + E+ + D+ S
Sbjct: 117 GKAVQEYNGPREAEGIVTYLKKQSGPASAEIKSADDASEVVS 158
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHC++L P A ++D V +AK+D T + F V G+ T+
Sbjct: 402 PWCGHCQKLAPILDEVAVSYQSD-SSVVIAKLDAT-ANDFPKDTFDVKGFPTIYFKSASG 459
Query: 437 LXSEYNGPRESNGIVKYM 490
Y G R+ + ++
Sbjct: 460 NVVVYEGDRQRESLYLFI 477
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCT-EGGKSTCEQFSVXGYSTLKIFR-X 430
PWCGHCK+L PEY AA L ++VPPV LAK+D + E + Q+ V G+ T+KIFR
Sbjct: 57 PWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNG 116
Query: 431 XELXSEYNGPRESNGIVKYMPCPSWTSFXELLTVXDSEAFTS 556
+ EYNGPRE+ GIV Y+ S + E+ + D+ S
Sbjct: 117 GKAVQEYNGPREAEGIVTYLKKQSGPASAEIKSADDASEVVS 158
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHC++L P A ++D V +AK+D T + F V G+ T+
Sbjct: 402 PWCGHCQKLAPILDEVAVSYQSD-SSVVIAKLDAT-ANDFPKDTFDVKGFPTIYFKSASG 459
Query: 437 LXSEYNGPRESNGIVKYM 490
Y G R + ++
Sbjct: 460 NVVVYEGDRTKEDFISFV 477
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 85.4 bits (202), Expect = 2e-17
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCT-EGGKSTCEQFSVXGYSTLKIFR-X 430
PWCGHC++L PEY AA L + PP+ALAK+D + E K ++ + G+ TLKI R
Sbjct: 56 PWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPTLKILRNG 115
Query: 431 XELXSEYNGPRESNGIVKYMPCPSWTSFXEL 523
+ +YNGPRE+ GIV Y+ S + E+
Sbjct: 116 GKSVQDYNGPREAEGIVTYLKKQSGPASVEI 146
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHC++L P A + D P V +AK+D T + F V G+ T+
Sbjct: 400 PWCGHCQKLAPILDEVALSFQND-PSVIIAKLDAT-ANDIPSDTFDVKGFPTIYFRSASG 457
Query: 437 LXSEYNGPRESNGIVKYM 490
Y G R + ++
Sbjct: 458 NVVVYEGDRTKEDFINFV 475
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 108 FKMFGSLKFVLLLGIIYLCKAAEED---VLDLTDSDFSAVLSQHDTALVMFY 254
FK F +LLL + +EE VL L S+F+ +S+HD +V FY
Sbjct: 3 FKGFACFSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFIVVEFY 54
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHCK+L PEY K V +AKVDC E KS C ++ V GY T++ F
Sbjct: 50 PWCGHCKKLAPEYEKLGASFK-KAKSVLIAKVDCDE-QKSVCTKYGVSGYPTIQWFPKGS 107
Query: 437 L-XSEYNGPRESNGIVKYM 490
L +Y GPR + + +Y+
Sbjct: 108 LEPQKYEGPRNAEALAEYV 126
Score = 55.6 bits (128), Expect = 2e-08
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIF-RXX 433
PWCGHCK L P Y A + K + V +A +D + K+ E++ V G+ TLK F +
Sbjct: 169 PWCGHCKSLAPTYEKVATVFKQE-EGVVIANLD-ADAHKALGEKYGVSGFPTLKFFPKDN 226
Query: 434 ELXSEYNGPRESNGIVKYMPCPSWTS 511
+ +Y+G R+ + V ++ S TS
Sbjct: 227 KAGHDYDGGRDLDDFVSFINEKSGTS 252
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 132 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFY 254
F L + L A +DV+ LTD F + + ALV FY
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFY 48
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHCK+L PEY K V +AKVDC E KS C ++ V GY T++ F
Sbjct: 50 PWCGHCKKLAPEYEKLGASFK-KAKSVLIAKVDCDE-QKSVCTKYGVSGYPTIQWFPKGS 107
Query: 437 L-XSEYNGPRESNGIVKYM 490
L +Y GPR + + +Y+
Sbjct: 108 LEPQKYEGPRNAEALAEYV 126
Score = 55.6 bits (128), Expect = 2e-08
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIF-RXX 433
PWCGHCK L P Y A + K + V +A +D + K+ E++ V G+ TLK F +
Sbjct: 169 PWCGHCKSLAPTYEKVATVFKQE-EGVVIANLD-ADAHKALGEKYGVSGFPTLKFFPKDN 226
Query: 434 ELXSEYNGPRESNGIVKYMPCPSWTS 511
+ +Y+G R+ + V ++ S TS
Sbjct: 227 KAGHDYDGGRDLDDFVSFINEKSGTS 252
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 132 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFY 254
F L + L A +DV+ LTD F + + ALV FY
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFY 48
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 66.1 bits (154), Expect = 1e-11
Identities = 36/100 (36%), Positives = 53/100 (53%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCG C+ L PEYA AA LK ALAK+D TE G +++ + G+ T+ +F E
Sbjct: 126 PWCGACQALTPEYAAAATELK---GLAALAKIDATEEG-DLAQKYEIQGFPTVFLFVDGE 181
Query: 437 LXSEYNGPRESNGIVKYMPCPSWTSFXELLTVXDSEAFTS 556
+ Y G R +GIV ++ + S + T ++E S
Sbjct: 182 MRKTYEGERTKDGIVTWLKKKASPSIHNITTKEEAERVLS 221
Score = 33.5 bits (73), Expect = 0.098
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 248 VLPPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCT 361
+ PWCGHC+ +P Y LK + + +AK+D T
Sbjct: 462 IYAPWCGHCQSFEPIYNKLGKYLK-GIDSLVVAKMDGT 498
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 64.1 bits (149), Expect = 6e-11
Identities = 38/96 (39%), Positives = 49/96 (51%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHC+ L PEYA AA LK D V LAK+D TE + +++ V G+ TL F E
Sbjct: 130 PWCGHCQSLAPEYAAAATELKED--GVVLAKIDATEENE-LAQEYRVQGFPTLLFFVDGE 186
Query: 437 LXSEYNGPRESNGIVKYMPCPSWTSFXELLTVXDSE 544
Y G R IV ++ L T+ D+E
Sbjct: 187 -HKPYTGGRTKETIVTWVKKKIGPGVYNLTTLDDAE 221
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 248 VLPPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCT--EGGKSTCEQF 391
V PWCGHC+ L+P Y A L++ + + + K+D T E K+ E F
Sbjct: 466 VYAPWCGHCQALEPMYNKLAKHLRS-IDSLVITKMDGTTNEHPKAKAEGF 514
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 64.1 bits (149), Expect = 6e-11
Identities = 38/96 (39%), Positives = 49/96 (51%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHC+ L PEYA AA LK D V LAK+D TE + +++ V G+ TL F E
Sbjct: 130 PWCGHCQSLAPEYAAAATELKED--GVVLAKIDATEENE-LAQEYRVQGFPTLLFFVDGE 186
Query: 437 LXSEYNGPRESNGIVKYMPCPSWTSFXELLTVXDSE 544
Y G R IV ++ L T+ D+E
Sbjct: 187 -HKPYTGGRTKETIVTWVKKKIGPGVYNLTTLDDAE 221
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 248 VLPPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCT--EGGKSTCEQF 391
V PWCGHC+ L+P Y A L++ + + + K+D T E K+ E F
Sbjct: 466 VYAPWCGHCQALEPMYNKLAKHLRS-IDSLVITKMDGTTNEHPKAKAEGF 514
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHCKRL PE AA +L P+ +AK++ + + + + + TL ++
Sbjct: 59 PWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSR-LARKIEIDAFPTLMLYNHG- 116
Query: 437 LXSEYNGPRESNGIVKYM 490
+ EY GPR+++ +V+Y+
Sbjct: 117 VPMEYYGPRKADLLVRYL 134
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 183 VLDLTDSDFSAVLSQHDTALVMFY 254
VL+LTDS+F + +S D V FY
Sbjct: 34 VLELTDSNFDSAISTFDCIFVDFY 57
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHCK L P + A +LK V VA D + S + + + G+ T+K+F +
Sbjct: 58 PWCGHCKALTPTWEKVANILK-GVATVAAIDADAHQ---SAAQDYGIKGFPTIKVFVPGK 113
Query: 437 LXSEYNGPRESNGIVKY 487
+Y G R++ I +
Sbjct: 114 APIDYQGARDAKSIANF 130
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHCK+L PE+ AA L+ V L V+C + +S +F V G+ T+ +F +
Sbjct: 190 PWCGHCKKLAPEWKRAAKNLQ---GKVKLGHVNC-DVEQSIMSRFKVQGFPTILVFGPDK 245
Query: 437 LXS-EYNGPRESNGIVKY 487
Y G R ++ I +
Sbjct: 246 SSPYPYEGARSASAIESF 263
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHC+ L P + A LK + VA D KS + + V G+ T+K+F +
Sbjct: 56 PWCGHCQSLTPTWEKVASTLK-GIATVAAIDAD---AHKSVSQDYGVRGFPTIKVFVPGK 111
Query: 437 LXSEYNGPRESNGIVKY 487
+Y G R++ I ++
Sbjct: 112 PPIDYQGARDAKSISQF 128
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCGHCK+L PE+ AA LK V L V+C + +S +F V G+ T+ +F +
Sbjct: 191 PWCGHCKKLAPEWKKAANNLK---GKVKLGHVNC-DAEQSIKSRFKVQGFPTILVFGSDK 246
Query: 437 LXS-EYNGPRESNGIVKY 487
Y G R ++ I +
Sbjct: 247 SSPVPYEGARSASAIESF 264
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPP-----VALAKVDCTEGGKSTCEQFSVXGYSTLKI 421
PWC C LKP + AA +K P V LAKVDCT+ G C + + GY +++I
Sbjct: 168 PWCYWCNLLKPSWEKAAKQIKERYDPEMDGRVILAKVDCTQEG-DLCRRNHIQGYPSIRI 226
Query: 422 FR 427
FR
Sbjct: 227 FR 228
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 47.6 bits (108), Expect = 6e-06
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPP-----VALAKVDCTEGGKSTCEQFSVXGYSTLKI 421
PWC RLKP + AA ++K P V L VDCTE + C++ + GY +++I
Sbjct: 168 PWCYWSNRLKPSWEKAANIIKQRYDPEADGRVLLGNVDCTE-EPALCKRNHIQGYPSIRI 226
Query: 422 FRXXELXSEYNGPRE 466
FR E +G E
Sbjct: 227 FRKGSDLREDHGHHE 241
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/98 (31%), Positives = 43/98 (43%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWC L P +A AA LK V +AK+D E Q + G+ TL +F
Sbjct: 102 PWCARSAELMPRFAEAATDLKEIGSSVLMAKID-GERYSKVASQLEIKGFPTLLLFVNGT 160
Query: 437 LXSEYNGPRESNGIVKYMPCPSWTSFXELLTVXDSEAF 550
S Y G S IV ++ + S +L TV ++ F
Sbjct: 161 SQS-YTGGFSSEEIVIWVQKKTGASTIKLDTVDEASGF 197
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPP-----VALAKVDCTEGGKSTCEQFSVXGYSTLKI 421
PWC RLKP + A+ + + P V L VDCTE + C+ + GY +++I
Sbjct: 169 PWCYWSNRLKPSWVKASQITRERYNPGTDDRVLLGSVDCTE-EPTLCKSNHIQGYPSIRI 227
Query: 422 FRXXELXSEYNGPRE 466
FR E +G E
Sbjct: 228 FRRGSGLREDHGNHE 242
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWC HCK+L + ++ D + + +VDC ++ C + + Y T +F E
Sbjct: 53 PWCKHCKKLGNLWEDLGKAMEGD-DEIEVGEVDCGT-SRAVCTKVEIHSYPTFMLFYNGE 110
Query: 437 LXSEYNGPRESNGIVKYM 490
S+Y G R+ + ++
Sbjct: 111 EVSKYKGKRDVESLKAFV 128
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWC HCK+L + ++ D + + +VDC ++ C + + Y T +F E
Sbjct: 53 PWCKHCKKLGNLWEDLGKAMEGD-DEIEVGEVDCGT-SRAVCTKVEIHSYPTFMLFYNGE 110
Query: 437 LXSEYNGPRESNGIVKYM 490
S+Y G R+ + ++
Sbjct: 111 EVSKYKGKRDVESLKAFV 128
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWC HCK+L + ++ D + + +VDC ++ C + + Y T +F E
Sbjct: 53 PWCKHCKKLGNLWEDLGKAMEGD-DEIEVGEVDCGT-SRAVCTKVEIHSYPTFMLFYNGE 110
Query: 437 LXSEYNGPRESNGIVKYM 490
S+Y G R+ + ++
Sbjct: 111 EVSKYKGKRDVESLKAFV 128
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/98 (29%), Positives = 42/98 (42%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWC L P +A AA LK V +AK+D K E + G+ TL +F
Sbjct: 104 PWCARSAELMPRFAEAATALKEIGSSVLMAKIDGDRYSKIASE-LEIKGFPTLLLFVNGT 162
Query: 437 LXSEYNGPRESNGIVKYMPCPSWTSFXELLTVXDSEAF 550
+ YNG + IV ++ + L TV ++ F
Sbjct: 163 SLT-YNGGSSAEDIVIWVQKKTGAPIITLNTVDEAPRF 199
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 36.7 bits (81), Expect = 0.010
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXEL 439
WCG CK + P+Y L + K+DC + K ++ + T KI + ++
Sbjct: 108 WCGPCKVIAPKYKE----LSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKV 163
Query: 440 XSEYNGPR 463
E G +
Sbjct: 164 VKEVTGAK 171
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 36.3 bits (80), Expect = 0.014
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXEL 439
WCG CK + P+Y L V K+DC + ++ + T KI + ++
Sbjct: 98 WCGPCKVIAPKYKA----LSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKV 153
Query: 440 XSEYNGPR 463
E G +
Sbjct: 154 VKEVTGAK 161
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 33.5 bits (73), Expect = 0.098
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGG-KSTCEQFSVXGYSTLKIFRXXE 436
WCG C+ + P V L K P V KVD EGG +T + ++ TL F+
Sbjct: 117 WCGPCRFISP---VIVELSK-QYPDVTTYKVDIDEGGISNTISKLNITAVPTLHFFKGGS 172
Query: 437 LXSEYNG 457
E G
Sbjct: 173 KKGEVVG 179
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLK--TDVPP--VALAKVDCT-EGGKSTCEQFSVXGYSTL 415
WC C+ KP Y A L + P V + +VDC + C++FSV Y L
Sbjct: 65 WCPACRNYKPHYEKVARLFNGPDAIHPGIVLMTRVDCAMKTNTKLCDKFSVSHYPML 121
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 31.9 bits (69), Expect = 0.30
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTC-EQFSVXGYSTLKIFRXXE 436
WCG C+ + P L P V KVD EGG S + +V TL+ F+
Sbjct: 82 WCGPCRLISPVILE----LSNKYPDVTTYKVDIDEGGLSNAIGKLNVSAVPTLQFFKGGV 137
Query: 437 LXSEYNG 457
+E G
Sbjct: 138 KKAEIVG 144
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLK--TDVPP--VALAKVDCT-EGGKSTCEQFSVXGYSTL 415
WC C+ KP Y A L V P V + +VDC + C++FS+ Y L
Sbjct: 71 WCPACRNYKPHYEKVARLFNGADAVYPGVVLMTRVDCAIKMNVKLCDKFSINHYPML 127
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLK--TDVPP--VALAKVDCT-EGGKSTCEQFSVXGYSTL 415
WC C+ KP Y A L V P V + +VDC + C++FS+ Y L
Sbjct: 71 WCPACRNYKPHYEKVARLFNGADAVYPGVVLMTRVDCAIKMNVKLCDKFSINHYPML 127
>At1g08430.1 68414.m00932 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 493
Score = 30.7 bits (66), Expect = 0.69
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 24 VLSLILSFVRFGWKAE*LVRFC*KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDS 203
+L ++L FV+ VRF KF +G L F+L +I L +E+++DL +S
Sbjct: 108 ILLVMLVFVQAALST--FVRFFPWVKTKFD-YGILIFILTFALISLSGFRDEEIMDLAES 164
Query: 204 DFSAVL 221
S V+
Sbjct: 165 RLSTVV 170
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXE 436
PWCG C+ + P + L K K++ T+ +T ++ + T+ IF+ E
Sbjct: 114 PWCGPCRMIHP---IVDQLAKDFAGKFKFYKIN-TDESPNTANRYGIRSVPTVIIFKGGE 169
Query: 437 LXSEYNG--PRES 469
G PRE+
Sbjct: 170 KKDSIIGAVPRET 182
>At1g01020.1 68414.m00002 transmembrane ARV1-like family protein
contains similarity to ARV1 [Homo sapiens]
gi|12044055|gb|AAG47671
Length = 128
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 200 FRLFGCFIST*YSPGHVLPPWCGHCKRLKPEY 295
FR+ FI YSPG++ CG+CK + EY
Sbjct: 13 FRVKSLFIQ--YSPGNIRLMKCGNCKEVADEY 42
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 260 WCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIFRXXEL 439
WCG C+ + P +A A L P V KVD T+ KS +++ T + ++
Sbjct: 39 WCGPCRFIAPFFADLAKKL----PNVLFLKVD-TDELKSVASDWAIQAMPTFMFLKEGKI 93
Query: 440 XSEYNGPRE 466
+ G ++
Sbjct: 94 LDKVVGAKK 102
>At1g08440.1 68414.m00933 hypothetical protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 501
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 78 VRFC*KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVL 221
VRF + A++ +G L F+L +I + E+++LDL S V+
Sbjct: 121 VRFFPRVKARYD-YGVLIFILTFALISVSGFREDEILDLAHKRLSTVI 167
>At3g43270.1 68416.m04567 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 527
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 102 AKFKMFGSLKFVLLLGIIYLCKAAEE 179
AKF+ GS F L L II LC A +E
Sbjct: 2 AKFRQMGSSIFFLFLIIISLCSAHKE 27
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 257 PWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVXGYSTLKIF 424
PWCG CK + P + L + + K++ T+ +T Q+ V T+ IF
Sbjct: 108 PWCGPCKMIDP---LVNDLAQHYTGKIKFYKLN-TDESPNTPGQYGVRSIPTIMIF 159
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,397,469
Number of Sequences: 28952
Number of extensions: 217847
Number of successful extensions: 496
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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