Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0579
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 124 5e-29
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 124 5e-29
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 62 3e-10
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 62 3e-10
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 61 5e-10
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 58 5e-09
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 54 4e-08
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 54 4e-08
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 52 2e-07
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 50 7e-07
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 45 3e-05
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 42 2e-04
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 41 6e-04
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 39 0.002
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 37 0.007
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 37 0.007
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 37 0.009
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 36 0.016
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 33 0.15
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 32 0.26
AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical ... 31 0.59
U61945-6|AAB03129.2| 199|Caenorhabditis elegans Hypothetical pr... 29 1.4
AL023828-28|CAI46623.1| 117|Caenorhabditis elegans Hypothetical... 28 3.2
AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical ... 28 3.2
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 27 5.5
AF024503-17|AAG24085.1| 354|Caenorhabditis elegans Hypothetical... 27 5.5
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 124 bits (298), Expect = 5e-29
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +1
Query: 253 MNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLS 432
+NL WECAIPG+K T WEGGLY++RM+FKDD PS+P KCKFEPPL HPNVYPSGTV LS
Sbjct: 36 LNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLS 95
Query: 433 LL*LKKXXGXPAITIKQIL 489
LL K P+I+IKQ+L
Sbjct: 96 LLDENKDW-KPSISIKQLL 113
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +2
Query: 149 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGS 253
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGT 35
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 124 bits (298), Expect = 5e-29
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +1
Query: 253 MNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLS 432
+NL WECAIPG+K T WEGGLY++RM+FKDD PS+P KCKFEPPL HPNVYPSGTV LS
Sbjct: 36 LNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLS 95
Query: 433 LL*LKKXXGXPAITIKQIL 489
LL K P+I+IKQ+L
Sbjct: 96 LLDENKDW-KPSISIKQLL 113
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/35 (77%), Positives = 32/35 (91%)
Frame = +2
Query: 149 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGS 253
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGT 35
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 61.7 bits (143), Expect = 3e-10
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
N++TWE I G + TP+E G +KL + F ++ P+ P KF + HPNVY G++ L +
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 436 L 438
L
Sbjct: 92 L 92
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 61.7 bits (143), Expect = 3e-10
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
N++TWE I G + TP+E G +KL + F ++ P+ P KF + HPNVY G++ L +
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 436 L 438
L
Sbjct: 92 L 92
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 60.9 bits (141), Expect = 5e-10
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +1
Query: 265 TWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSLL 438
+W C +PG +G+PWEGG Y++ + F P P C+F+ PL HPNV G++ L +L
Sbjct: 70 SWICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKML 126
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 57.6 bits (133), Expect = 5e-09
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
N WEC I G + T + G++ R+ F D P SP K +F + HPN+Y G V +S+
Sbjct: 33 NFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISI 92
Query: 436 L 438
L
Sbjct: 93 L 93
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 54.4 bits (125), Expect = 4e-08
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
+L W+ I G +P++GG++ L + F D P P K F + HPN+ +G++ L +
Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 88
Query: 436 L*LKKXXGXPAITIKQIL 489
L + PA+TI ++L
Sbjct: 89 L---RSQWSPALTISKVL 103
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 54.4 bits (125), Expect = 4e-08
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
+L W+ I G +P++GG++ L + F D P P K F + HPN+ +G++ L +
Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 88
Query: 436 L*LKKXXGXPAITIKQIL 489
L + PA+TI ++L
Sbjct: 89 L---RSQWSPALTISKVL 103
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
NL W I G T ++GG +K + F + P SP KF + HPNVY +G + +S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 436 L 438
L
Sbjct: 98 L 98
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 50.4 bits (115), Expect = 7e-07
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
++ WE + G T +EGG +K + F D P P K KF + HPN+ G V +S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 436 L 438
L
Sbjct: 92 L 92
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSL 435
N + I G +P+ GG++KL + ++ P + K +F + HPN+ G + L +
Sbjct: 32 NARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDI 91
Query: 436 L*LKKXXGXPAITIKQIL 489
L K PA+ I+ +L
Sbjct: 92 L---KDKWSPALQIRTVL 106
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNV-YPSGTVXLS 432
NL + I G TP+ GG++ L + D P SP KF + HPNV +G + L
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 433 LL*LKKXXGXPAITIKQIL 489
+L K ++T++ +L
Sbjct: 95 IL---KDQWAASLTLRTVL 110
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 NLMTWECA-IPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLS 432
NL+ W IP K+ P+ G +K+ + F D P P K FE + HPNV G L
Sbjct: 31 NLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Query: 433 LL 438
++
Sbjct: 89 IV 90
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +1
Query: 226 EAYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSP 363
E Y NL W I G GT +EGG+Y R+IF D P P
Sbjct: 27 EMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKP 72
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPP-----LXHPNVYPSGTVXLSLL 438
I G TP+ GL++ + F P SP KC F +PN+Y G + LS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL 506
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSP 363
N++ W I G TP+EGG+Y +++F D P P
Sbjct: 36 NILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKP 71
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYP-SGTVXL 429
I G + TP+EGG+++L + + P KF + HP+V P GT+ L
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICL 435
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 35.9 bits (79), Expect = 0.016
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSP 363
N++ W + G TP+ GG Y ++IFK++ P SP
Sbjct: 47 NILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSP 82
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSPXK---------------CKFEPPL 390
NLM + I G +GTP+ GG +++++ + P P K KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 391 XHPNV-YPSGTVXLSLL*LKKXXGXPAITIKQIL 489
HPN+ +GT+ L +L K ++T++ +L
Sbjct: 109 WHPNISSQTGTICLDIL---KDKWTASLTLRTVL 139
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPS 414
I G TP+E G++++ + F D+ P++ + KF+ + + V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical
protein C23H5.11 protein.
Length = 394
Score = 30.7 bits (66), Expect = 0.59
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 321 IQPTFPWSPLFTRYRTFPSH*IHEPSGFFIGLATKPK--GWSLRQAFRSSAKRALAIPDI 148
I + P+ + RTF SH H S FF G+A +PK S + S R +A +
Sbjct: 277 ISYSLPFPLMLVLSRTFRSHLFHLISNFFQGVARRPKIRKDSALRKMTSQIARHMAFSKL 336
Query: 147 FYKNNSIYEPSFN 109
+N+ + E ++
Sbjct: 337 EMENSELDERMYS 349
>U61945-6|AAB03129.2| 199|Caenorhabditis elegans Hypothetical
protein C49C8.6 protein.
Length = 199
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 374 NLNHHXSTPMCIHQVRCXCHCFD*RKXXAVQQSQLSK 484
N NH I ++ C HC + K +++SQLSK
Sbjct: 109 NKNHWKIGEQIIEEIGCNFHCTENVKSRKIEESQLSK 145
>AL023828-28|CAI46623.1| 117|Caenorhabditis elegans Hypothetical
protein Y17G7B.24 protein.
Length = 117
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 326 SLYSPPSHGVPFLPGIAHSQ-VIKFMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLT 150
S SPP H P P I + ++ H S AS Q P K+S+ +NVH +SLT
Sbjct: 3 STRSPPEHSPPCSPLIRRQRPATLYVKH--SPRASHVAQF--PIKKISIPTVNVHKMSLT 58
Query: 149 FSTKIT 132
+ +T
Sbjct: 59 NAECLT 64
>AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical
protein F46F5.14 protein.
Length = 353
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 220 CREAYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFK 342
CR AY +S+ F +L T+E I G + G K+R++ K
Sbjct: 207 CRSAYNKSKNFNDLFTYEACIKAMMGVGTDFG--KVRILKK 245
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 304 WEGGLYKLRMIFKDDXPSSPXKCKFEPPLXHPNVYPSGTVXLSLL 438
+ GG ++ ++ + + P K + HPN+ G++ LS+L
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSIL 116
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 262 MTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSP 363
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 262 MTWECAIPGKKGTPWEGGLYKLRMIFKDDXPSSP 363
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
>AF024503-17|AAG24085.1| 354|Caenorhabditis elegans Hypothetical
protein F31F4.1 protein.
Length = 354
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 205 PSLWFCREAYEESRWFMNLMTWECAIPGKKGTPWEGGLYKLRMIFK 342
P L CR+ YE+S+ + +L T+E I G + G K+R++ K
Sbjct: 203 PKLEKCRKFYEKSKSYEDLFTFEACIRDLLGDSIDFG--KIRILEK 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,277,236
Number of Sequences: 27780
Number of extensions: 212147
Number of successful extensions: 426
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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