Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0574
(360 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 151 3e-38
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 148 2e-37
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 132 2e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 129 1e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 89 1e-19
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 57 9e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 39 2e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.12
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 3.5
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 25 4.7
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 24 6.2
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 24 6.2
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 6.2
SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomy... 24 8.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 151 bits (366), Expect = 3e-38
Identities = 71/94 (75%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Frame = +1
Query: 82 AVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVADEPNX 261
++GIDLGTTYSCVG F + +VEIIANDQ NRTTPSYVAFTDTERLIGDA KNQVA P+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 262 TIFDAKRXIGRKFXDATXXADMKHWPFEVVS-DG 360
TIFDAKR IGRKF D +DMKHWPF+V+S DG
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDG 97
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 148 bits (359), Expect = 2e-37
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +1
Query: 82 AVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVADEPNX 261
++GIDLGTTYSCVG F + +VEIIANDQ NRTTPSYVAFTDTERLIGDA KNQVA P+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 262 TIFDAKRXIGRKFXDATXXADMKHWPFEVV-SDG 360
TIFDAKR IGR+F D +DMKHWPF+V+ DG
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDG 97
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 132 bits (318), Expect = 2e-32
Identities = 58/92 (63%), Positives = 71/92 (77%)
Frame = +1
Query: 82 AVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVADEPNX 261
A+GIDLGTTYSCV V++ VEII NDQ RTTPS+VAFT+TERL+GDA KNQ A P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 262 TIFDAKRXIGRKFXDATXXADMKHWPFEVVSD 357
T+FDAKR IGR++ D D+KHWPF+V+ +
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDN 99
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 129 bits (312), Expect = 1e-31
Identities = 58/91 (63%), Positives = 70/91 (76%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVADEPNXT 264
+GIDLGTTYSCV V ++G+VEIIANDQ NR TPSYVAFT+ ERL+G+A KNQ P T
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 265 IFDAKRXIGRKFXDATXXADMKHWPFEVVSD 357
IFD KR IGRKF + T D+K +PF +V+D
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVND 128
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 89.4 bits (212), Expect = 1e-19
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +1
Query: 73 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFT-DTERLIGDAXKNQVAD 249
K P +GIDLGTT SC+ + + ++IAN + RTTPS VAFT D ERL+G + K Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 250 EPNXTIFDAKRXIGRKFXDATXXADMKHWPFEVV 351
P T F KR IGR+F + D+K P+++V
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 56.8 bits (131), Expect = 9e-10
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 70 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVAD 249
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+A K+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 250 EPNXTIFDAKRXIGRKFXD 306
T+ KR GR + D
Sbjct: 63 NFRNTVGSLKRLAGRTYDD 81
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 39.1 bits (87), Expect = 2e-04
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVADEPNXT 264
+GI G S + + GK +++AN++ NR PS +++ + G + Q+ + +
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 265 IFDAKRXIGRKFXDAT 312
+ + + +G+ + T
Sbjct: 87 VTNFRDLLGKSHDELT 102
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.9 bits (64), Expect = 0.12
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHG-KVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVADEPNX 261
+ ID GT ++ + + G +EI+ R S VAF ER+ G N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 262 TIFDAKRXI 288
+I + K +
Sbjct: 85 SIRNVKELL 93
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.0 bits (52), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 249 ICHLVLXGISDETLGVCERNIRRSGPVALVVGDDLHLPV 133
I H++L +D + GV I G +A V G+D+ + V
Sbjct: 647 IIHVILPKAADTSPGVSSAIISALGELASVEGEDMPVDV 685
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 24.6 bits (51), Expect = 4.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 80 PQ*ESIWVPRTLALVSSSTGRWRSSPTTXAT 172
P S W+P LVS+ W +SP++ T
Sbjct: 284 PLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 6.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 RTLALVSSSTGR-WRSSPTTXATGPLRLMLRSQTPSVSSEMP 229
++L VSS++ + RSSP +L R TP+V + P
Sbjct: 351 QSLTTVSSNSSQNGRSSPKKSFLSKFKLTSRPSTPNVGNTAP 392
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.2 bits (50), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 88 GIDLGTTYSCVGVFQHGKVEIIANDQXNR 174
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 24.2 bits (50), Expect = 6.2
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 82 AVGIDLGTTYSCVGVFQHGKVEIIANDQXNRT 177
A+G LG Y+C+ +F + +A + T
Sbjct: 428 AIGFKLGYIYACINLFSSFMIFFLAKETKGLT 459
>SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 23.8 bits (49), Expect = 8.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -1
Query: 240 LVLXGISDETL-GVCERNIRRSGPVALVVGDDLHLPVLEDTNARVRGT--QIDSYCG 79
+VL SD L G C + + + V + LHLP ++ N V T +++CG
Sbjct: 228 VVLRNGSDGCLIGACTSSTNATSDAVVPVREILHLPSVQMKNGSVLDTTGAGNAFCG 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,379,724
Number of Sequences: 5004
Number of extensions: 24545
Number of successful extensions: 77
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 110009772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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