Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0574
(360 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 164 1e-41
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 164 1e-41
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 144 1e-35
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 144 1e-35
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 144 1e-35
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 132 5e-32
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 132 5e-32
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 130 2e-31
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 86 6e-18
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 86 6e-18
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 80 4e-16
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 80 4e-16
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 67 4e-12
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 56 1e-08
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 35 0.020
Z70783-4|CAA94854.1| 178|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 3.0
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 3.0
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 26 6.9
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 26 6.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 164 bits (399), Expect = 1e-41
Identities = 76/96 (79%), Positives = 82/96 (85%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVA 246
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQ NRTTPSYVAFTDTERLIGDA KNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 247 DEPNXTIFDAKRXIGRKFXDATXXADMKHWPFEVVS 354
P+ T+FDAKR IGRKF D +DMKHWPF+V+S
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVIS 96
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 164 bits (399), Expect = 1e-41
Identities = 76/96 (79%), Positives = 82/96 (85%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVA 246
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQ NRTTPSYVAFTDTERLIGDA KNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 247 DEPNXTIFDAKRXIGRKFXDATXXADMKHWPFEVVS 354
P+ T+FDAKR IGRKF D +DMKHWPF+V+S
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVIS 96
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 144 bits (350), Expect = 1e-35
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVA 246
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN + N+TTPSYVAFTDTERL+GDA K+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 247 DEPNXTIFDAKRXIGRKFXDATXXADMKHWPFEV 348
P T+FDAKR IGR+F ++T +D KHWPF V
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 144 bits (350), Expect = 1e-35
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVA 246
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN + N+TTPSYVAFTDTERL+GDA K+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 247 DEPNXTIFDAKRXIGRKFXDATXXADMKHWPFEV 348
P T+FDAKR IGR+F ++T +D KHWPF V
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 144 bits (350), Expect = 1e-35
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVA 246
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN + N+TTPSYVAFTDTERL+GDA K+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 247 DEPNXTIFDAKRXIGRKFXDATXXADMKHWPFEV 348
P T+FDAKR IGR+F + T +D+KHWPF V
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTV 94
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 132 bits (320), Expect = 5e-32
Identities = 61/91 (67%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFT--DTERLIGDAXKNQVADEPN 258
+GIDLGTTYSCVGV+++G+VEIIANDQ NR TPSYVAF+ +RLIGDA KNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 259 XTIFDAKRXIGRKFXDATXXADMKHWPFEVV 351
TIFDAKR IGR + D T AD+KHWPF+V+
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVI 126
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 132 bits (320), Expect = 5e-32
Identities = 61/91 (67%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFT--DTERLIGDAXKNQVADEPN 258
+GIDLGTTYSCVGV+++G+VEIIANDQ NR TPSYVAF+ +RLIGDA KNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 259 XTIFDAKRXIGRKFXDATXXADMKHWPFEVV 351
TIFDAKR IGR + D T AD+KHWPF+V+
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVI 126
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 130 bits (315), Expect = 2e-31
Identities = 61/91 (67%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFT--DTERLIGDAXKNQVADEPN 258
+GIDLGTTYSCVGVF++G+VEIIANDQ NR TPSYVAF+ ERLIGDA KNQ+ P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 259 XTIFDAKRXIGRKFXDATXXADMKHWPFEVV 351
TIFDAKR IGR + + T D+KHWPF++V
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIV 123
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 86.2 bits (204), Expect = 6e-18
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +1
Query: 82 AVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAF-TDTERLIGDAXKNQVADEPN 258
++GIDLGTT+SCV +Q+G+V I+ N+ RTTPS +A D + LIG K+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 259 XTIFDAKRXIGRKFXDATXXADMKHWPFEVVSD 357
++FD KR IGR++ D DM WPF+V D
Sbjct: 62 -SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKD 93
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 86.2 bits (204), Expect = 6e-18
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +1
Query: 82 AVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAF-TDTERLIGDAXKNQVADEPN 258
++GIDLGTT+SCV +Q+G+V I+ N+ RTTPS +A D + LIG K+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 259 XTIFDAKRXIGRKFXDATXXADMKHWPFEVVSD 357
++FD KR IGR++ D DM WPF+V D
Sbjct: 62 -SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKD 93
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 80.2 bits (189), Expect = 4e-16
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 73 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFT-DTERLIGDAXKNQVAD 249
K +GIDLGTT SCV + + ++I N + RTTPS VAFT D ERL+G K Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 250 EPNXTIFDAKRXIGRKFXDATXXADMKHWPFEVV 351
T+F KR IGR++ D D+K P+++V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 80.2 bits (189), Expect = 4e-16
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 73 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFT-DTERLIGDAXKNQVAD 249
K +GIDLGTT SCV + + ++I N + RTTPS VAFT D ERL+G K Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 250 EPNXTIFDAKRXIGRKFXDATXXADMKHWPFEVV 351
T+F KR IGR++ D D+K P+++V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 66.9 bits (156), Expect = 4e-12
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = +1
Query: 58 KYKMAKAPA--VGIDLGTTYSCVGVFQH--GKVEIIANDQXNRTTPSYVAFTDTER-LIG 222
KY + P GIDLGTTYS +G++ G+ I+ +D ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 223 DAXKNQVADEPNXTIFDAKRXIGRKF--XDATXXADMKHWPFEVVSD 357
Q P TI+DAKR IGR F + +D K +PF++ D
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLD 131
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 55.6 bits (128), Expect = 1e-08
Identities = 29/89 (32%), Positives = 44/89 (49%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQXNRTTPSYVAFTDTERLIGDAXKNQVADEPNXT 264
+G D+G +GV + G +E+I ND TP+ V+F +R +G A + V T
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 265 IFDAKRXIGRKFXDATXXADMKHWPFEVV 351
+ + K IGRKF D + P +VV
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVV 92
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 34.7 bits (76), Expect = 0.020
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 82 AVGIDLGTTYSCVGVFQHG-KVEIIANDQXNRTTPSYVAFTDTERLIGDA 228
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADA 75
>Z70783-4|CAA94854.1| 178|Caenorhabditis elegans Hypothetical
protein ZK856.6 protein.
Length = 178
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = -1
Query: 237 VLXGISDETLGVCERNIRR-SGPVALVVGDDLHLPVLEDTNARVRGTQIDSY------CG 79
+L G+S++T VC+ IR+ P + + + + +D + + T ++ C
Sbjct: 62 ILVGLSEKTEEVCKTKIRQHHRPQYGHIANGSRVEIQQDEESSLEATFVECLGENRPPCH 121
Query: 78 XFCHFVFLISLVTCS*NNSANVRLV 4
H +F+ VT + ANVR+V
Sbjct: 122 GVDHDLFISECVTVYEHRPANVRVV 146
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 147 DHRQRPXQQDHSVLCCVHRHRASHRRCRQ 233
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 147 DHRQRPXQQDHSVLCCVHRHRASHRRCRQ 233
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 125 SSSTGRWRSSPTTXATGPLRLMLRSQTPSVSSEMPXRTRWQMNPTXQYSMPNVSSDVSS 301
+S+ R S P+T AT P ML++ + P ++ + T Y+ V V++
Sbjct: 757 NSAASRPPSQPSTPATAPATPMLQASQAPQPLQAPPQSPMETTATVTYTKTTVPPSVAN 815
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 98 WVPRTLALVSSSTGRWRSSPTTXATGPLRLMLRSQTPSVSSEMP 229
WV L V+++ W++ PLRL L + +V + +P
Sbjct: 217 WVSNLLPCVTANITNWKTPTNDEMCPPLRLELNQKIFNVENYIP 260
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 146 RSSPTTXATGPLRLMLRSQTPSVSSEMPXRTRWQMNPTXQYSMPN 280
RSSP++ TG ++ S P +SSE T + PT PN
Sbjct: 143 RSSPSSP-TGSETVVSTSSPPELSSESTPNTSGSVIPTSPVFKPN 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,892,335
Number of Sequences: 27780
Number of extensions: 150296
Number of successful extensions: 352
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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