Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0572
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        30   0.077
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.7  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   5.0  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   5.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   6.7  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 0.077
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +1

Query: 79  LLIG--AGCGFYFHNASITQNLRRAAEKLYEDPIEEVERRLLIASGLPNRTGDQ 234
           +LIG  +  GFY  N  + Q +R  + +L+E   +E+E  +L   GLP+R   Q
Sbjct: 16  VLIGLVSSTGFYIDNG-VDQTVREKSVELHER--QEIEHEILELLGLPDRPNKQ 66


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 24  KNIRNSCRKIW*CNCYR*LINR 89
           ++++  CRK W   C+R L+NR
Sbjct: 780 ESLKFECRKQWLRRCHRPLVNR 801


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 577 WLLHGPSCRIRHEMILNTD 521
           WL+HG S R    ++LN D
Sbjct: 184 WLIHGASPRPAPVLVLNAD 202


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 577 WLLHGPSCRIRHEMILNTD 521
           WL+HG S R    ++LN D
Sbjct: 185 WLIHGASPRPAPVLVLNAD 203


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 196 LIASGLPNRTGDQIRALIDGMSAPIGRINR 285
           L+ASG  +R G+ +R L+  +    G +NR
Sbjct: 699 LVASGDDSRQGEMLRKLLALIKLFAGDVNR 728


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,084
Number of Sequences: 2352
Number of extensions: 11243
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)