Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0565
         (352 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   3.7  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   3.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   8.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   8.5  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 62  QMTTAIDHYGLIAK 21
           Q+ +A+D YGL+A+
Sbjct: 137 QLFSAVDPYGLVAQ 150


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 304 LATXCFVWDHASY 266
           +A+ CF W + SY
Sbjct: 119 VASNCFFWSYQSY 131


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 304 LATXCFVWDHASY 266
           +A+ CF W + SY
Sbjct: 119 VASNCFFWSYQSY 131


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 105 LREGPXR*LPPDGPADDH 52
           LR+   +  PPD P DD+
Sbjct: 82  LRDAVEKRPPPDEPIDDY 99


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +1

Query: 67  AVWRQSSXRSFSKGTKLLWFAANK 138
           + W  ++ R   K  K+ W   NK
Sbjct: 132 STWFANARRRLKKENKMTWEPKNK 155


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -2

Query: 336 PSYVXSLLXAFLPRXVLCGIMPLTVFH 256
           PS+  S + +FL       ++P  ++H
Sbjct: 34  PSFKLSKIRSFLNITASAVLLPFAIYH 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,427
Number of Sequences: 336
Number of extensions: 1236
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)