Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0565
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p pro...   132   2e-31
AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB ...   132   2e-31

>AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p
           protein.
          Length = 205

 Score =  132 bits (318), Expect = 2e-31
 Identities = 55/82 (67%), Positives = 71/82 (86%)
 Frame = +3

Query: 12  MTGFSNKAIVIDGRGHLLGRLAAVIXKVLLEGNKVVVVRCEQXNISGNFFRNKLKLMSFL 191
           MTG +N+ +VIDGRGHLLGRLA+V+ K LL+G KV VVRCE+ N+SG+F+RNK+K +++L
Sbjct: 1   MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60

Query: 192 RKRCXVNPAXGPFHFXAPSKIY 257
           RKRC VNPA GPFHF APS+I+
Sbjct: 61  RKRCNVNPARGPFHFRAPSRIF 82



 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 257 WKTVRGMIPHKTXRGKNAXRRLXTYDGCSPPF 352
           +K VRGMIPHKT RG+ A  RL  +DG   P+
Sbjct: 83  YKAVRGMIPHKTKRGQAALARLRVFDGIPSPY 114


>AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB
           protein.
          Length = 205

 Score =  132 bits (318), Expect = 2e-31
 Identities = 55/82 (67%), Positives = 71/82 (86%)
 Frame = +3

Query: 12  MTGFSNKAIVIDGRGHLLGRLAAVIXKVLLEGNKVVVVRCEQXNISGNFFRNKLKLMSFL 191
           MTG +N+ +VIDGRGHLLGRLA+V+ K LL+G KV VVRCE+ N+SG+F+RNK+K +++L
Sbjct: 1   MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60

Query: 192 RKRCXVNPAXGPFHFXAPSKIY 257
           RKRC VNPA GPFHF APS+I+
Sbjct: 61  RKRCNVNPARGPFHFRAPSRIF 82



 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 257 WKTVRGMIPHKTXRGKNAXRRLXTYDGCSPPF 352
           +K VRGMIPHKT RG+ A  RL  +DG   P+
Sbjct: 83  YKAVRGMIPHKTKRGQAALARLRVFDGIPSPY 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,575,535
Number of Sequences: 53049
Number of extensions: 243132
Number of successful extensions: 365
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)