Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0559
         (476 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   1.4  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    25   1.8  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   4.1  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   4.1  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.2  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   7.2  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    22   9.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   9.6  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 289 MLADPSGNFIKALDLGTNLPXLGGFRSKRFSMVIVDSKVQDLNVEP 426
           M+AD S N  + L+ GT+   + G + +    +  D K+  L+VEP
Sbjct: 749 MMADISAN--EYLEYGTHEDAMYGTKLETIRRIHADGKMAILDVEP 792


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 86  LTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAE 211
           +T GK + LFA+ G     C +     Y+Q   +  +D + E
Sbjct: 173 ITWGKVISLFAIAGGLAVDCVRQDHADYLQQLIEGTADVIEE 214


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -3

Query: 165  PGKCVLEHP---GVKAPGTANNTTFFPAVNSQIFTLL 64
            PGKC+  HP    +K  GTA  + F  ++ S I T +
Sbjct: 1213 PGKCISYHPEEIEIKQCGTA-TSLFHASLYSTIATFI 1248


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 436 QCHRAPHSDLGPCC 395
           QCH+A H D+G  C
Sbjct: 341 QCHKALHLDIGLRC 354


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 116 QIIQPSFPPSTHKYSP 69
           + IQP FPP+  + SP
Sbjct: 398 EAIQPEFPPTPPQLSP 413


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 259 LPSRHHIRVINRHAHYFSNSIRF 191
           LP+ H   V NR    F+N  RF
Sbjct: 475 LPTNHARTVSNRFVRLFTNFARF 497


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 71  VNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKL 190
           +N+  LT GK        G  T GC+ T   G   N DK+
Sbjct: 52  INVVGLTPGKHGFHIHEKGDLTDGCAST---GGHYNPDKV 88


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 442 TGQCHRAPHSDLGPCCQR 389
           TG+C +  H+  GP C +
Sbjct: 848 TGECLKCIHNTAGPHCDQ 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,695
Number of Sequences: 2352
Number of extensions: 11006
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)