Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0559
(476 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 1.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 1.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.1
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 21 5.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 6.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.0
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 255 QAAITYGSLTDTHTISATPSDFSLSAF 175
Q AITY D T+ +PS SL+A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 255 QAAITYGSLTDTHTISATPSDFSLSAF 175
Q AITY D T+ +PS SL+A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 255 QAAITYGSLTDTHTISATPSDFSLSAF 175
Q AITY D T+ +PS SL+A+
Sbjct: 262 QTAITYVWKNDEGTLRKSPSLTSLNAY 288
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 255 QAAITYGSLTDTHTISATPSDFSLSAF 175
Q AITY D T+ +PS SL+A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +2
Query: 296 PIPAATSSRLWTWAPICRRSEVSAPKGSRWS 388
P+P A + + + + C++ + +A GSR++
Sbjct: 564 PLPLARTPSVMSASSTCKKDKKNAGSGSRFT 594
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 3.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = -3
Query: 192 FSLSAFCTYPGKCVLEHPGVKAPGTANNTTFFP 94
+ S T+ G C+ PG+ + T+FP
Sbjct: 87 YQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFP 119
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = -3
Query: 192 FSLSAFCTYPGKCVLEHPGVKAPGTANNTTFFP 94
+ S T+ G C+ PG+ + T+FP
Sbjct: 87 YQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFP 119
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 21.4 bits (43), Expect = 5.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 82 TNIHLISGRIFE*ISSRQLIXD-LNS 8
TN+HL +IF+ I+ + I D LNS
Sbjct: 110 TNVHLKITKIFQCITKFKTINDILNS 135
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 6.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 142 SRGEGARHRK*YNLLSRRQLTNIHLISGRIFE 47
SR E R ++ LL RQL +HL I E
Sbjct: 220 SRNEITRLQENSPLLDLRQLQELHLQRNAIVE 251
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.0
Identities = 8/33 (24%), Positives = 14/33 (42%)
Frame = -3
Query: 192 FSLSAFCTYPGKCVLEHPGVKAPGTANNTTFFP 94
+ S T+ G C+ PG+ + +FP
Sbjct: 87 YQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFP 119
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.6 bits (41), Expect = 9.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 107 QPSFPPSTHKYSPY*RENLRINQQQ 33
QPS T + PY + L+I Q+
Sbjct: 452 QPSIRTYTQQQFPYVHDTLQIQPQE 476
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 300 SQRQLHQGSGPGHQ 341
SQ H+GS P HQ
Sbjct: 324 SQYHPHRGSSPHHQ 337
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,271
Number of Sequences: 438
Number of extensions: 2876
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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