Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0557
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089403-1|AAL90141.1|  415|Drosophila melanogaster AT22836p pro...    29   5.4  
AE014297-4163|AAN14122.1|  415|Drosophila melanogaster CG31055-P...    29   5.4  
Z14311-1|CAA78663.1|  490|Drosophila melanogaster Cpo 17 protein.      28   7.2  

>AY089403-1|AAL90141.1|  415|Drosophila melanogaster AT22836p
           protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 258 EFRQLCHCSVSNQNNGIVTR*PRFSLGRLERRLCVVSR 145
           + ++L   S+S   NG++ R  RF+ G++ R   + SR
Sbjct: 4   DLKELLLVSMSTSPNGVIRRHKRFNFGKIRRTPSLASR 41


>AE014297-4163|AAN14122.1|  415|Drosophila melanogaster CG31055-PA,
           isoform A protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 258 EFRQLCHCSVSNQNNGIVTR*PRFSLGRLERRLCVVSR 145
           + ++L   S+S   NG++ R  RF+ G++ R   + SR
Sbjct: 4   DLKELLLVSMSTSPNGVIRRHKRFNFGKIRRTPSLASR 41


>Z14311-1|CAA78663.1|  490|Drosophila melanogaster Cpo 17 protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 107 SRCKDLIRIPPTERETTHNRLSSLPKEKRGQRVTIPL 217
           S+  D +     E E +H+  S++PK+KR +++ I +
Sbjct: 435 SQSMDSVNTASNEEEVSHSFHSAIPKDKRNKKLQIKI 471


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,574,353
Number of Sequences: 53049
Number of extensions: 347439
Number of successful extensions: 1036
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)