Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0556
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   5.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   5.3  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   5.3  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   6.9  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.9  
Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related prot...    23   9.2  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = +1

Query: 472 KVMVNIIFGIVHIIW 516
           K+ ++IIFG+VH+I+
Sbjct: 522 KMKLSIIFGVVHMIF 536


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = +1

Query: 472 KVMVNIIFGIVHIIW 516
           K+ ++IIFG+VH+I+
Sbjct: 533 KMKLSIIFGVVHMIF 547


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 315 CPNKSNIYHECSTFC 359
           CP+ SN +H    FC
Sbjct: 475 CPDGSNAHHSSGAFC 489


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 172 QNADSTAVASVGQINEEIIAE 234
           Q A ++AVA++G++ E I+AE
Sbjct: 89  QAALNSAVAAIGKLVEPIVAE 109


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 371 PSFNTKSRTFMINITF 324
           P+FN   RT +++ITF
Sbjct: 156 PTFNRNKRTSIVDITF 171


>Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related
           protease protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 537 VRVVSTNPDYVHNSKNNVD 481
           VRV    P  +H SKNN D
Sbjct: 114 VRVARIVPHPMHGSKNNYD 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,324
Number of Sequences: 2352
Number of extensions: 12570
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)