Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0551
         (633 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52079-1|CAA36298.1|  622|Homo sapiens ITF-2 DNA binding protein...    33   1.1  
M74719-1|AAA60311.1|  667|Homo sapiens SEF2-1B protein protein.        33   1.1  
BC125085-1|AAI25086.1|  667|Homo sapiens transcription factor 4 ...    33   1.1  
BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled recep...    31   3.4  
BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled recep...    31   3.4  
AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled recep...    31   3.4  
AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coup...    31   3.4  
AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane hel...    31   3.4  

>X52079-1|CAA36298.1|  622|Homo sapiens ITF-2 DNA binding protein
           protein.
          Length = 622

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 18/59 (30%), Positives = 35/59 (59%)
 Frame = +2

Query: 134 EQTEDRRL*D*KRTIEEVCSMYADQITADDQGREIQEGRRLAKVPNAEDKLKVEKLIDA 310
           + +ED++L D K+ I+ + S   D+    +Q  E ++ RR+A   NA ++L+V  + +A
Sbjct: 482 KSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKAEREKERRMAN--NARERLRVRDINEA 538


>M74719-1|AAA60311.1|  667|Homo sapiens SEF2-1B protein protein.
          Length = 667

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 18/59 (30%), Positives = 35/59 (59%)
 Frame = +2

Query: 134 EQTEDRRL*D*KRTIEEVCSMYADQITADDQGREIQEGRRLAKVPNAEDKLKVEKLIDA 310
           + +ED++L D K+ I+ + S   D+    +Q  E ++ RR+A   NA ++L+V  + +A
Sbjct: 527 KSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKAEREKERRMAN--NARERLRVRDINEA 583


>BC125085-1|AAI25086.1|  667|Homo sapiens transcription factor 4
           protein.
          Length = 667

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 18/59 (30%), Positives = 35/59 (59%)
 Frame = +2

Query: 134 EQTEDRRL*D*KRTIEEVCSMYADQITADDQGREIQEGRRLAKVPNAEDKLKVEKLIDA 310
           + +ED++L D K+ I+ + S   D+    +Q  E ++ RR+A   NA ++L+V  + +A
Sbjct: 527 KSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKAEREKERRMAN--NARERLRVRDINEA 583


>BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = -2

Query: 155 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 33
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219


>BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = -2

Query: 155 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 33
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219


>AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = -2

Query: 155 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 33
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219


>AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 470

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = -2

Query: 155 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 33
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219


>AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 470

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = -2

Query: 155 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 33
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,159,134
Number of Sequences: 237096
Number of extensions: 1696789
Number of successful extensions: 3811
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3811
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)