Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0549
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    73   5e-15
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            24   2.9  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            24   2.9  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            24   2.9  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            22   8.8  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    22   8.8  

>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 72.9 bits (171), Expect = 5e-15
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = +3

Query: 51  GKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF 230
           GKKYKM  SE FD++M  +GVG++ RK  N+++PTVEL K+GDEY   T S  +T     
Sbjct: 35  GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSS 94

Query: 231 KPGEEFEE 254
               EF+E
Sbjct: 95  SWAMEFDE 102



 Score = 27.5 bits (58), Expect = 0.23
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 266 GAKVKSVCTFEGNTL 310
           G  VKSVCTF+GN L
Sbjct: 107 GRMVKSVCTFDGNKL 121


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 129 KAANAVTPTVELRKDGDEYNLVTSST 206
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 129 KAANAVTPTVELRKDGDEYNLVTSST 206
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 129 KAANAVTPTVELRKDGDEYNLVTSST 206
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 129 KAANAVTPTVELRKDGDEYNLVTSST 206
           K     TPT  +   GD+ N   +ST
Sbjct: 89  KTGTGATPTSSIASSGDDTNSSNNST 114


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 202 EEVTKLYSSPSLRSS 158
           E V K+YSS SLR S
Sbjct: 128 ENVIKVYSSKSLRKS 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,750
Number of Sequences: 2352
Number of extensions: 7039
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)