Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0549
         (452 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p pro...   106   2e-23
BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p pro...   104   6e-23
BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p pro...   104   6e-23
AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB...   104   6e-23
AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC...   104   6e-23
BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p pro...    69   4e-12
BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p pro...    69   4e-12
AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA...    69   4e-12
AY089569-1|AAL90307.1|  168|Drosophila melanogaster RE04580p pro...    27   8.9  
AE014298-2796|AAF48913.1|  168|Drosophila melanogaster CG7406-PA...    27   8.9  

>BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p
           protein.
          Length = 142

 Score =  106 bits (254), Expect = 2e-23
 Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
 Frame = +3

Query: 36  KMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKT 215
           KM FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT
Sbjct: 12  KMSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKT 71

Query: 216 TEMKFKPGEEFEETAL---TVLR*NPYAHSKATPXSKSXRPPTXLKSLT 353
           + + FK G EF+E  L    V        +K T   K  +P T ++  T
Sbjct: 72  SAISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 120


>BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p
           protein.
          Length = 130

 Score =  104 bits (249), Expect = 6e-23
 Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +3

Query: 39  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 218
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 219 EMKFKPGEEFEETAL---TVLR*NPYAHSKATPXSKSXRPPTXLKSLT 353
            + FK G EF+E  L    V        +K T   K  +P T ++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108


>BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p
           protein.
          Length = 130

 Score =  104 bits (249), Expect = 6e-23
 Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +3

Query: 39  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 218
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 219 EMKFKPGEEFEETAL---TVLR*NPYAHSKATPXSKSXRPPTXLKSLT 353
            + FK G EF+E  L    V        +K T   K  +P T ++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108


>AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB,
           isoform B protein.
          Length = 130

 Score =  104 bits (249), Expect = 6e-23
 Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +3

Query: 39  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 218
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 219 EMKFKPGEEFEETAL---TVLR*NPYAHSKATPXSKSXRPPTXLKSLT 353
            + FK G EF+E  L    V        +K T   K  +P T ++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108


>AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC,
           isoform C protein.
          Length = 157

 Score =  104 bits (249), Expect = 6e-23
 Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +3

Query: 39  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 218
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 219 EMKFKPGEEFEETAL---TVLR*NPYAHSKATPXSKSXRPPTXLKSLT 353
            + FK G EF+E  L    V        +K T   K  +P T ++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108


>BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p
           protein.
          Length = 117

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +3

Query: 102 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEETAL---TVL 272
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + FK G EF+E  L    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 273 R*NPYAHSKATPXSKSXRPPTXLKSLT 353
                  +K T   K  +P T ++  T
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT 95


>BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p
           protein.
          Length = 117

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +3

Query: 102 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEETAL---TVL 272
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + FK G EF+E  L    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 273 R*NPYAHSKATPXSKSXRPPTXLKSLT 353
                  +K T   K  +P T ++  T
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT 95


>AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA,
           isoform A protein.
          Length = 117

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +3

Query: 102 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEETAL---TVL 272
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + FK G EF+E  L    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 273 R*NPYAHSKATPXSKSXRPPTXLKSLT 353
                  +K T   K  +P T ++  T
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT 95


>AY089569-1|AAL90307.1|  168|Drosophila melanogaster RE04580p
           protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -1

Query: 179 VTILTELHGRGDRVGGFAGDQTHADGLHELIKVL---GGSH 66
           V +++E  G G   GG++G   HA    +++KV+   G SH
Sbjct: 46  VKVISEEAGHGGWAGGYSGGYAHAPEEVKIVKVISEAGHSH 86


>AE014298-2796|AAF48913.1|  168|Drosophila melanogaster CG7406-PA
           protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -1

Query: 179 VTILTELHGRGDRVGGFAGDQTHADGLHELIKVL---GGSH 66
           V +++E  G G   GG++G   HA    +++KV+   G SH
Sbjct: 46  VKVISEEAGHGGWAGGYSGGYAHAPEEVKIVKVISEAGHSH 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,999,286
Number of Sequences: 53049
Number of extensions: 314530
Number of successful extensions: 1364
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)