Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0548
(405 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 25 0.37
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 23 1.1
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 23 1.1
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 23 1.1
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 23 1.1
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 23 1.1
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 22 2.0
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 3.5
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 4.6
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 6.1
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 6.1
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 20 8.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 8.0
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 24.6 bits (51), Expect = 0.37
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 199 PTKVSISSNTSARTSQKAVCVQHTQHPR 116
PT VSI++NTS +S + V H R
Sbjct: 156 PTPVSINNNTSTSSSASSPSVTAAPHLR 183
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.0 bits (47), Expect = 1.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 142 CVQHTQHPRPG 110
C+Q+ QHP PG
Sbjct: 78 CMQYIQHPLPG 88
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.0 bits (47), Expect = 1.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 142 CVQHTQHPRPG 110
C+Q+ QHP PG
Sbjct: 78 CMQYIQHPLPG 88
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.0 bits (47), Expect = 1.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 142 CVQHTQHPRPG 110
C+Q+ QHP PG
Sbjct: 78 CMQYIQHPLPG 88
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.0 bits (47), Expect = 1.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 142 CVQHTQHPRPG 110
C+Q+ QHP PG
Sbjct: 78 CMQYIQHPLPG 88
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.0 bits (47), Expect = 1.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 142 CVQHTQHPRPG 110
C+Q+ QHP PG
Sbjct: 78 CMQYIQHPLPG 88
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 22.2 bits (45), Expect = 2.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 156 HRKRFVSSTRNIRG 115
HR++FVS R +RG
Sbjct: 193 HREQFVSLVRELRG 206
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 3.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 67 FIAFYIFLLVVEVGSRAADV 126
F+ YIF+ V VGS DV
Sbjct: 365 FLLNYIFIAVGIVGSACTDV 384
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 326 IYTCXTSYWPPLNQCQKYTI 267
I T T Y+P + C +TI
Sbjct: 268 IVTLSTHYFPVFSACDYFTI 287
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 20.6 bits (41), Expect = 6.1
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +1
Query: 67 FIAFYIFLLVVEVGSRAADVACAGHKPLSVMFA 165
F+A + ++ E+ V C H+P S +++
Sbjct: 253 FMALTVMQVLKEMAMTGKTVICTIHQPSSEVYS 285
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 20.6 bits (41), Expect = 6.1
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +1
Query: 67 FIAFYIFLLVVEVGSRAADVACAGHKPLSVMFA 165
F+A + ++ E+ V C H+P S +++
Sbjct: 253 FMALTVMQVLKEMAMTGKTVICTIHQPSSEVYS 285
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 141 VSSTRNIRGPASHLHY 94
++ RNIRGP L +
Sbjct: 277 LTQIRNIRGPRKRLRF 292
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -3
Query: 253 YRRPTRVLYHPKGRLVLHPTKVSISSNTSARTS 155
+++PT+ Y P TK + S+ T T+
Sbjct: 1166 WQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTT 1198
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,379
Number of Sequences: 336
Number of extensions: 1888
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8752267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -