Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0548
(405 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 0.57
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 4.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 4.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 4.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 4.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 4.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 4.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 4.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 4.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 5.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 7.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 20 9.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 20 9.3
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 0.57
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTILKVD 211
S+ Y YN + +P YY I+ ++
Sbjct: 317 SLSNNYNYNNYNNNYKPLYYNIINIE 342
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 84 SLSNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 84 SLSNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 84 SLSNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 84 SLSNNYNYNNYNNNYKPLYYNI 105
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 317 SLSNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 317 SLSNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 317 SLSNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 288 SMPKIYYYNTFITGDRPAYYTI 223
S+ Y YN + +P YY I
Sbjct: 306 SLSNNYNYNNYNNNYKPLYYNI 327
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 5.3
Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = -3
Query: 160 TSQKA-VCVQHTQHPRPGFPPPLP 92
T QK + Q +Q P G P P P
Sbjct: 2 TQQKQPIITQQSQQPSSGAPGPQP 25
Score = 20.6 bits (41), Expect = 7.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 181 SSNTSARTSQKAVCVQHTQHPRPGFPPPLP 92
S + S + Q+ +Q P PG PP P
Sbjct: 26 SPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 20.6 bits (41), Expect = 7.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 178 YLSIPWSGATLIDL*DGIIRGS 243
Y+S+ W GA I L +I G+
Sbjct: 161 YVSLVWLGAACISLPPLLIMGN 182
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.2 bits (40), Expect = 9.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 269 IIIPSLQETDPRIIPS*RSISVAPDQ 192
I + +++ DP I + SI VAP Q
Sbjct: 56 ITVCNMENVDPLGIHTGESIVVAPSQ 81
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.2 bits (40), Expect = 9.3
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = -2
Query: 167 CANITESGLCPAHATSAARLPTST 96
C + GLCP R+P T
Sbjct: 446 CCFAQDDGLCPYTLKHKIRVPPGT 469
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,475
Number of Sequences: 438
Number of extensions: 2400
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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