Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0544
(520 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 144 4e-35
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 144 4e-35
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 144 4e-35
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 144 4e-35
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 144 4e-35
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 144 4e-35
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 144 4e-35
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 144 4e-35
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 142 1e-34
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 113 5e-26
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 113 5e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 112 1e-25
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 112 1e-25
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 94 6e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 68 4e-12
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.040
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.040
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 4.6
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 28 4.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 4.6
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.6
U80441-10|AAB37658.1| 269|Caenorhabditis elegans Hypothetical p... 27 6.1
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 27 6.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.1
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.0
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 112 bits (270), Expect = 1e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 111 bits (266), Expect = 4e-25
Identities = 48/52 (92%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 65 APLNPKAN-REKMTQIMFETFNTPAMY 90
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 95 APLNPKAN-REKMTQIMFETFNTPAMY 120
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3
Query: 153 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 38
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 144 bits (348), Expect = 4e-35
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 109 APLNPKAN-REKMTQIMFETFNTPAMY 134
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 142 bits (344), Expect = 1e-34
Identities = 66/87 (75%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP +N RE + + TPA+Y
Sbjct: 108 APLNPKSN-REKMTQIMFETFNTPAMY 133
Score = 107 bits (257), Expect = 5e-24
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 8e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 113 bits (273), Expect = 5e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 8e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 112 bits (270), Expect = 1e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 8e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 112 bits (270), Expect = 1e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 346
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 93.9 bits (223), Expect = 6e-20
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Frame = +2
Query: 242 GTEGP-YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 415
G +G ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 416 TEAXLNPXANXREDDPXHVSKHSTTPALY 502
T+A LNP N RE + PALY
Sbjct: 110 TDAPLNPLKN-RERSAEIFFETFNVPALY 137
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 239
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 68.5 bits (160), Expect = 3e-12
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 260 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAXLNP 436
VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE LNP
Sbjct: 57 VGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNP 116
Query: 437 XAN 445
+N
Sbjct: 117 NSN 119
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 215
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 68.1 bits (159), Expect = 4e-12
Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLN 433
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE LN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 434 PXANXREDDPXHVSKHSTTPALY 502
N RE + + P LY
Sbjct: 126 TPEN-REYTAEIMFESFNVPGLY 147
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 206
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 311 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNPXANXREDDPXHVSKHSTT 490
++ G++ +W+ EKI H++ N L P EHPVL +E+ N A RE + +
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRAR-REKLTEIMFEKFQV 152
Query: 491 PALY 502
PA Y
Sbjct: 153 PAYY 156
Score = 33.5 bits (73), Expect = 0.093
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 206
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
+E K + ++ PIE G V NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
+E K + ++ PIE G V NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -2
Query: 360 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPTYGPSVPYRPSRPDG 217
CQ+FS QLVT+ SMG +++++ L L AS + P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 203 RGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 270 SSPTYGPSVP-YRPSRPDGGAFPR 202
SSPTY PS P Y P+ P G + P+
Sbjct: 1754 SSPTYTPSSPTYNPTSPRGFSSPQ 1777
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 194 PLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
P RG P GRDGR +GP G +Q RG
Sbjct: 472 PGRRGSGGPEGRDGR--GQGPDFGPGSQGGRG 501
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 194 PLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
P RG P GRDGR +GP G +Q RG
Sbjct: 537 PGRRGSGGPEGRDGR--GQGPDFGPGSQGGRG 566
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 270 SSPTYGPSVP-YRPSRPDGGAFPR 202
SSPTY PS P Y P+ P G + P+
Sbjct: 1761 SSPTYTPSSPTYNPTSPRGFSSPQ 1784
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 153 KAGFAGDDAPRAVFPSIVGRPRHQG 227
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>U80441-10|AAB37658.1| 269|Caenorhabditis elegans Hypothetical
protein F27C1.1 protein.
Length = 269
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 375 MSCVSPPRNTLSCSLRLPSTPXPT 446
M C S P +CS+++P +P PT
Sbjct: 72 MKCASCPLLCFNCSVQMPVSPVPT 95
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 206 GKAPPSGRDGRYGTEGPYVGDEAQS 280
G+A P+GRDG G +GP +G + S
Sbjct: 206 GEAGPNGRDGTRGQKGP-IGPKGDS 229
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 406
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 406
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,269,358
Number of Sequences: 27780
Number of extensions: 276635
Number of successful extensions: 1140
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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