Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0544
(520 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 142 1e-34
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 142 2e-34
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 142 2e-34
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 140 5e-34
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 139 9e-34
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 139 9e-34
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 138 2e-33
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 138 2e-33
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 138 2e-33
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 126 1e-29
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 118 2e-27
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 117 5e-27
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 75 2e-14
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 67 8e-12
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 60 1e-09
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 58 5e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 42 3e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.050
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 30 0.81
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 30 0.81
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 29 2.5
At2g20950.4 68415.m02474 expressed protein 28 3.3
At2g20950.3 68415.m02473 expressed protein 28 3.3
At2g20950.2 68415.m02472 expressed protein 28 3.3
At2g20950.1 68415.m02471 expressed protein 28 3.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 3.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 3.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.7
At2g29995.1 68415.m03649 expressed protein 27 7.6
At1g63700.1 68414.m07209 protein kinase, putative contains prote... 27 7.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 142 bits (344), Expect = 1e-34
Identities = 67/87 (77%), Positives = 72/87 (82%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 110 APLNPKAN-REKMTQIMFETFNTPAMY 135
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 142 bits (343), Expect = 2e-34
Identities = 67/87 (77%), Positives = 71/87 (81%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 110 APLNPKAN-REKMTQIMFETFNTPAMY 135
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 142 bits (343), Expect = 2e-34
Identities = 67/87 (77%), Positives = 71/87 (81%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + TPA+Y
Sbjct: 110 APLNPKAN-REKMTQIMFETFNTPAMY 135
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 140 bits (339), Expect = 5e-34
Identities = 66/87 (75%), Positives = 71/87 (81%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + PA+Y
Sbjct: 110 APLNPKAN-REKMTQIMFETFNVPAMY 135
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 139 bits (337), Expect = 9e-34
Identities = 65/87 (74%), Positives = 70/87 (80%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + PA+Y
Sbjct: 110 APLNPKAN-REKMTQIMFETFNAPAMY 135
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 139 bits (337), Expect = 9e-34
Identities = 65/87 (74%), Positives = 70/87 (80%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 422 AXLNPXANXREDDPXHVSKHSTTPALY 502
A LNP AN RE + + PA+Y
Sbjct: 110 APLNPKAN-REKMTQIMFETFNAPAMY 135
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD 53
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 138 bits (334), Expect = 2e-33
Identities = 63/82 (76%), Positives = 70/82 (85%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNP 436
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 437 XANXREDDPXHVSKHSTTPALY 502
AN RE + + +PA+Y
Sbjct: 115 KAN-REKMTQIMFETFNSPAMY 135
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 138 bits (334), Expect = 2e-33
Identities = 63/82 (76%), Positives = 70/82 (85%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNP 436
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 437 XANXREDDPXHVSKHSTTPALY 502
AN RE + + +PA+Y
Sbjct: 115 KAN-REKMTQIMFETFNSPAMY 135
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 138 bits (334), Expect = 2e-33
Identities = 63/82 (76%), Positives = 70/82 (85%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNP 436
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 437 XANXREDDPXHVSKHSTTPALY 502
AN RE + + +PA+Y
Sbjct: 115 KAN-REKMTQIMFETFNSPAMY 135
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKD 53
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 126 bits (303), Expect = 1e-29
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNP 436
+VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEA LNP
Sbjct: 56 FVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNP 115
Query: 437 XANXREDDPXHVSKHSTTPALY 502
N RE + + P++Y
Sbjct: 116 KVN-REKMTQIMFESFAFPSMY 136
Score = 87.8 bits (208), Expect = 4e-18
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKD 54
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 118 bits (284), Expect = 2e-27
Identities = 52/82 (63%), Positives = 67/82 (81%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNP 436
+VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEA LNP
Sbjct: 10 FVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNP 69
Query: 437 XANXREDDPXHVSKHSTTPALY 502
A+ RE + + P++Y
Sbjct: 70 KAD-REKMTQIMFETFAVPSMY 90
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 117 bits (281), Expect = 5e-27
Identities = 58/92 (63%), Positives = 65/92 (70%)
Frame = +2
Query: 227 RDGRYGTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 406
RDG E YVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNES-YVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 407 VLLTEAXLNPXANXREDDPXHVSKHSTTPALY 502
VLLTEA NP AN RE + + PA+Y
Sbjct: 94 VLLTEAPYNPKAN-REKMTQIMFESFDVPAMY 124
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 218
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 75.4 bits (177), Expect = 2e-14
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = +2
Query: 260 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNPX 439
VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ LNP
Sbjct: 55 VGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPS 114
Query: 440 AN 445
N
Sbjct: 115 KN 116
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 215
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 66.9 bits (156), Expect = 8e-12
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 YVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAX 427
Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 428 LNPXANXREDDPXHVSKHSTTPALY 502
L P + RE + + P LY
Sbjct: 129 LTPPES-REYTGEILFETFNVPGLY 152
Score = 35.9 bits (79), Expect = 0.016
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 120 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 206
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 59.7 bits (138), Expect = 1e-09
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLN 433
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E LN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 434 PXANXREDDPXHVSKHSTTPALY 502
RE + + PAL+
Sbjct: 136 -TQQQREKAAELMFEKYKVPALF 157
Score = 56.8 bits (131), Expect = 8e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 209
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.6 bits (133), Expect = 5e-09
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 230 DGRYGTEGPYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 406
D G Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 407 VLLTEAXLN 433
+LL E LN
Sbjct: 121 MLLAEPPLN 129
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 209
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 224
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 299 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAXLNPXANXREDD 460
++ PI+ G + N D +IW H F + L +AP +LLTEA L+ + R D
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTD 114
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 215
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 34.3 bits (75), Expect = 0.050
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -1
Query: 358 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLVSYVRSF-CPIPTITP*WRGLPTIEGNT 188
P L V+ ++ D + + + + Y+ + P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 187 ARGASSPAKPALHIPEPLSTTNAATSS 107
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 30.3 bits (65), Expect = 0.81
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 308 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAXLNPXA 442
PIE G++ +WD ME + + Y L E +L T+ P A
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKA 102
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 120 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 212
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 30.3 bits (65), Expect = 0.81
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -2
Query: 354 IFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTYGPSVP 241
IFS SS+LVT P S+ +R R ++L SS + G P
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKP 47
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 239 YGTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 376
Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 264 PTYGPSVPYRPSRPDGGAFPRSRGT 190
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 264 PTYGPSVPYRPSRPDGGAFPRSRGT 190
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 264 PTYGPSVPYRPSRPDGGAFPRSRGT 190
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 264 PTYGPSVPYRPSRPDGGAFPRSRGT 190
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 394
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 394
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 220 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 98
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g29995.1 68415.m03649 expressed protein
Length = 71
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 374 NELRVAPEEHPVLLTEAXLNPXANXREDDP 463
NE+ V PE ++ T +P AN R D P
Sbjct: 34 NEMTVVPERSLMVSTNDYSDPTANGRHDPP 63
>At1g63700.1 68414.m07209 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to MEK kinase
(MAP3Ka) [Arabidopsis thaliana] gi|4204912|gb|AAD10848
Length = 883
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
Frame = -2
Query: 288 PLLL---CASSPTYG----PSVPYRPSRPDGGAFPRSR 196
PLL+ C SPTY PSVP P+R + P SR
Sbjct: 362 PLLISNTCPFSPTYSAATSPSVPRSPARAEATVSPGSR 399
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,620,053
Number of Sequences: 28952
Number of extensions: 260594
Number of successful extensions: 752
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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