Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0543
(517 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 116 4e-25
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 115 6e-25
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 113 3e-24
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 105 5e-22
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 105 6e-22
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 105 8e-22
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 102 4e-21
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 102 6e-21
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 101 1e-20
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 100 2e-20
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 98 9e-20
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 95 1e-18
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 90 3e-17
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 89 4e-17
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 89 4e-17
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 89 4e-17
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 87 2e-16
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 77 2e-13
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 75 1e-12
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 74 2e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 73 5e-12
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 72 9e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 72 9e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 72 9e-12
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 71 2e-11
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 71 2e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 71 2e-11
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 71 2e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 69 6e-11
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 65 8e-10
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 64 2e-09
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 62 6e-09
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 57 3e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 54 1e-06
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 53 4e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 52 8e-06
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 51 1e-05
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 51 2e-05
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 50 2e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 3e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 50 3e-05
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 48 1e-04
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 44 0.002
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 44 0.002
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 44 0.002
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.005
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 42 0.006
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 41 0.015
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 40 0.034
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 40 0.045
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 40 0.045
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.059
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 39 0.078
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 37 0.31
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 34 1.7
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 34 1.7
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 34 1.7
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 33 2.9
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 33 5.1
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 33 5.1
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 32 6.8
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 6.8
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 32 8.9
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 116 bits (278), Expect = 4e-25
Identities = 73/154 (47%), Positives = 78/154 (50%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLI 369
N LVPL+LGAPD+AFPR+ F PP L + + P
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSN 132
Query: 370 SAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
AH G SVDLA FSLHLAGISSI GA N ITTII
Sbjct: 133 IAHGGSSVDLAIFSLHLAGISSILGAINFITTII 166
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 115 bits (277), Expect = 6e-25
Identities = 73/148 (49%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Frame = -3
Query: 446 APXIDEIPAKCSEXIARSTDLPLCADIR*KWGVNCSSCSC---TIFYNSS*N**YKGGG* 276
AP I+E PAKC+E I STD P CA G TI N S K GG
Sbjct: 74 APKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSK---VKEGGS 130
Query: 275 ESKSYIIIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDP 96
+ IRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S PI P
Sbjct: 131 NQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLP 189
Query: 95 GFPNSARIKSLKDVPIIPDQIPKIKYNV 12
G PNSARIKSL DVP +P PK+KYNV
Sbjct: 190 GCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 113 bits (271), Expect = 3e-24
Identities = 67/130 (51%), Positives = 73/130 (56%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F PP L + + P AH G SVDLA FSLHLAGISSI
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 442 GAXNXITTII 471
GA N ITTII
Sbjct: 133 GAINFITTII 142
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 105 bits (253), Expect = 5e-22
Identities = 67/154 (43%), Positives = 74/154 (48%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLI 369
N LVPL++GAPD+AFPR+ F PP + P
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGN 136
Query: 370 SAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
AH G SVDLA FSLHLAGISSI GA N ITT I
Sbjct: 137 LAHAGASVDLAIFSLHLAGISSILGAINFITTAI 170
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 105 bits (252), Expect = 6e-22
Identities = 58/130 (44%), Positives = 72/130 (55%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F PP L+ L + P I AH G SVD+A FSLHLAG+SSI
Sbjct: 101 ISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSIL 160
Query: 442 GAXNXITTII 471
GA N ITT++
Sbjct: 161 GAMNFITTVM 170
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 105 bits (251), Expect = 8e-22
Identities = 61/130 (46%), Positives = 71/130 (54%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F PP L + P +AH G SVDLA FSLHLAG+SSI
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 442 GAXNXITTII 471
GA N ITT+I
Sbjct: 143 GAVNFITTVI 152
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 102 bits (245), Expect = 4e-21
Identities = 64/154 (41%), Positives = 75/154 (48%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLI 369
N LVPL++GAPD+AFPR+ F PP L + + P
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGN 135
Query: 370 SAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
+H G SVDL FSLHLAG+SSI GA N ITTII
Sbjct: 136 YSHPGASVDLTIFSLHLAGVSSILGAINFITTII 169
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 102 bits (244), Expect = 6e-21
Identities = 65/154 (42%), Positives = 73/154 (47%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLI 369
N LVPL++GAPD+AFPR+ F PP + P
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGN 135
Query: 370 SAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
AH G SVDL FSLHLAG+SSI GA N ITTII
Sbjct: 136 LAHAGASVDLTIFSLHLAGVSSILGAINFITTII 169
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 101 bits (241), Expect = 1e-20
Identities = 64/154 (41%), Positives = 73/154 (47%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLI 369
N L+PL++GAPD+AFPR+ F PP + P
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGN 124
Query: 370 SAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
AH G SVDL FSLHLAGISSI GA N ITTI+
Sbjct: 125 LAHAGASVDLTIFSLHLAGISSILGAINFITTIM 158
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 100 bits (239), Expect = 2e-20
Identities = 64/154 (41%), Positives = 72/154 (46%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLI 369
N LVPL++GAPD+AFPR+ F PP + P
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGN 135
Query: 370 SAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
AH G SVDL FSLHLAG+SSI GA N ITT I
Sbjct: 136 LAHAGASVDLTIFSLHLAGVSSILGAINFITTTI 169
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 98.3 bits (234), Expect = 9e-20
Identities = 59/130 (45%), Positives = 70/130 (53%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F P L + P LI H G SVDL FSLHLAG SSI
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 442 GAXNXITTII 471
GA N ITTI+
Sbjct: 144 GAVNFITTIL 153
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 94.7 bits (225), Expect = 1e-18
Identities = 55/122 (45%), Positives = 70/122 (57%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F +P +Y + K +DE TP +L++ G SVDLA F LHLAG+SSI
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTP-LYLVTISAGPSVDLAIFPLHLAGVSSIL 141
Query: 442 GA 447
G+
Sbjct: 142 GS 143
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 89.8 bits (213), Expect = 3e-17
Identities = 56/155 (36%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFH 363
N VP+++GAPD+AFPR+ F PP L L ++ P
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLS 136
Query: 364 LISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTI 468
I++H G +VDLA FSLHL+G+SSI G+ N ITTI
Sbjct: 137 GITSHSGGAVDLAIFSLHLSGVSSILGSINFITTI 171
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 89.4 bits (212), Expect = 4e-17
Identities = 58/156 (37%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFH 363
N LVP+++GAPD+AFPR+ F PP L + P
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 364 LISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
+ +H G SVDLA FSLHL+GISS+ GA N ITT++
Sbjct: 134 GLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVL 169
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 89.4 bits (212), Expect = 4e-17
Identities = 58/156 (37%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFH 363
N LVP+++GAPD+AFPR+ F PP L + P
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 364 LISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
+ +H G SVDLA FSLHL+GISS+ GA N ITT++
Sbjct: 134 GLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVL 169
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 89.4 bits (212), Expect = 4e-17
Identities = 58/156 (37%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFH 363
N LVP+++GAPD+AFPR+ F PP L + P
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 364 LISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
+ +H G SVDLA FSLHL+GISS+ GA N ITT++
Sbjct: 134 GLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVL 169
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 87.4 bits (207), Expect = 2e-16
Identities = 55/156 (35%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFH 363
N LVP+++G+PD+AFPR+ F PP L L ++ P
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLS 141
Query: 364 LISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
I +H G +VDLA FSLH++G SSI GA N I+TI+
Sbjct: 142 SIQSHSGGAVDLAIFSLHISGASSILGAVNFISTIL 177
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 77.4 bits (182), Expect = 2e-13
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 186
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 187 XXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQD----EQFTP 354
N L+PL++G PD+AFPR+ F PP L + + + P
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYP 163
Query: 355 HFHLISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTI 468
+ +H G SVDLA F+LHL+G+SS+ G+ N ITT+
Sbjct: 164 PLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTV 201
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 74.9 bits (176), Expect = 1e-12
Identities = 53/134 (39%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHL--ISAHRGRSVDLAXFSLHLAGI 429
F P L L + +T +F L I +H G +VDLA FSLHL+G
Sbjct: 104 NNISFWLLVPSLILILTSAL--VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 430 SSIXGAXNXITTII 471
SS+ GA N ITT I
Sbjct: 162 SSLLGAINFITTFI 175
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 74.1 bits (174), Expect = 2e-12
Identities = 51/130 (39%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = +1
Query: 82 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI- 255
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISS 435
I P + + F + V + P I +H G SVDLA F LHL+GISS
Sbjct: 100 NISYLLLIPSIVLFLFAGGIENGVGTGWTLYPP-LSGIQSHSGPSVDLAIFGLHLSGISS 158
Query: 436 IXGAXNXITT 465
+ GA N +TT
Sbjct: 159 LLGAMNFMTT 168
Score = 32.7 bits (71), Expect = 5.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
P NNI + +ENG GTG T+YPPLS
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLS 134
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 72.5 bits (170), Expect = 5e-12
Identities = 49/132 (37%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISS 435
F P L L + P I AH G SVDLA FSLHL ISS
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Query: 436 IXGAXNXITTII 471
+ GA N I T +
Sbjct: 159 LLGAINFIVTTL 170
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 71.7 bits (168), Expect = 9e-12
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 82 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 258
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 259 I*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSI 438
+ P L+ + + P I +H VDL F LHL+GISS+
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSL 185
Query: 439 XGAXNXITTII 471
GA N I T++
Sbjct: 186 LGAINFIATLL 196
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 71.7 bits (168), Expect = 9e-12
Identities = 50/132 (37%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISS 435
F P L L + P I AH G SVDLA F+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 436 IXGAXNXITTII 471
+ GA N I T +
Sbjct: 159 LLGAINFIVTTL 170
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 71.7 bits (168), Expect = 9e-12
Identities = 50/132 (37%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISS 435
F P L L + P I AH G SVDLA F+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 436 IXGAXNXITTII 471
+ GA N I T +
Sbjct: 159 LLGAINFIVTTL 170
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 70.5 bits (165), Expect = 2e-11
Identities = 44/127 (34%), Positives = 62/127 (48%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII*DF 270
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 271 DSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIXGAX 450
P + + L P + +H G S+D+A F+LHL+G+SSI GA
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 451 NXITTII 471
N + TII
Sbjct: 181 NLMVTII 187
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 70.5 bits (165), Expect = 2e-11
Identities = 44/127 (34%), Positives = 62/127 (48%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII*DF 270
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 271 DSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIXGAX 450
P + + L P + +H G S+D+A F+LHL+G+SSI GA
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 451 NXITTII 471
N + TII
Sbjct: 181 NLMVTII 187
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 70.5 bits (165), Expect = 2e-11
Identities = 44/127 (34%), Positives = 62/127 (48%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII*DF 270
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 271 DSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIXGAX 450
P + + L P + +H G S+D+A F+LHL+G+SSI GA
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 451 NXITTII 471
N + TII
Sbjct: 181 NLMVTII 187
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 70.5 bits (165), Expect = 2e-11
Identities = 44/127 (34%), Positives = 62/127 (48%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII*DF 270
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 271 DSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIXGAX 450
P + + L P + +H G S+D+A F+LHL+G+SSI GA
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 451 NXITTII 471
N + TII
Sbjct: 181 NLMVTII 187
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 68.9 bits (161), Expect = 6e-11
Identities = 47/132 (35%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISS 435
F P L L + P I AH G SVDLA F+LH+ ISS
Sbjct: 99 NNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISS 158
Query: 436 IXGAXNXITTII 471
+ GA N I T +
Sbjct: 159 LLGAINFIVTTL 170
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 65.3 bits (152), Expect = 8e-10
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +1
Query: 79 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 258
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 259 I*DFDSYPP 285
F PP
Sbjct: 100 NMSFWLLPP 108
Score = 33.1 bits (72), Expect = 3.9
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
P NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 63.7 bits (148), Expect = 2e-09
Identities = 44/134 (32%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISS 435
F P + + P + +H G SVDL FS HL GI S
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Query: 436 IXGAXNXITTII*Y 477
I A N I TI Y
Sbjct: 162 IVAAINFICTIFYY 175
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 62.5 bits (145), Expect = 6e-09
Identities = 36/85 (42%), Positives = 44/85 (51%)
Frame = +1
Query: 217 LILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVD 396
L LGAPD FPR I F PP L + + +P AH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 397 LAXFSLHLAGISSIXGAXNXITTII 471
LA FSLH+AG+ SI GA N I+T++
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVL 88
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 56.8 bits (131), Expect = 3e-07
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 79 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 252
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 253 III*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGIS 432
+ + Y F + F P R+VD A F++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 433 SIXGAXNXITTII 471
SI G+ N ITT +
Sbjct: 263 SILGSINFITTFL 275
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 54.4 bits (125), Expect = 1e-06
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 52.8 bits (121), Expect = 4e-06
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Frame = +1
Query: 121 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY* 300
++N ++TAH N VP+++GAPD+AFPR+ F P
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 301 FQEEL*K--MVQEQDEQFTPHFHL-ISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
+T + L S G +VD+A SLH+AG SSI GA N ITTI+
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTSGSAGPAVDMAILSLHIAGASSILGAINFITTIL 212
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 52.0 bits (119), Expect = 8e-06
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N VP+++G+PD+AFPR+ F PP L
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 51.2 bits (117), Expect = 1e-05
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 256 II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISS 435
F L +Q F P + S+D LH GI S
Sbjct: 109 NALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLS-VEGQPELSLDTMILGLHTVGIGS 167
Query: 436 IXGAXNXITT 465
+ GA N + T
Sbjct: 168 LLGAINFMVT 177
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 50.8 bits (116), Expect = 2e-05
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL +PG + + YN+++T+H N L+PL++GA D+AFPRI
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 262 *DFDSYPPP--LYY*FQEEL*KMVQEQD--EQFTPHF--HLISAHRGRSVDLAXFSLHLA 423
F PP L + + +++ Q +TP + VDL LHL+
Sbjct: 181 IAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAGVDLMLLGLHLS 240
Query: 424 GISSIXGAXNXITTI 468
G+S+ G+ N I TI
Sbjct: 241 GVSATMGSINFIATI 255
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 50.4 bits (115), Expect = 2e-05
Identities = 34/124 (27%), Positives = 49/124 (39%)
Frame = +1
Query: 97 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII*DFDS 276
G L GD Q YN ++T+H N +P++ G PD+ FPR+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 277 YPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIXGAXNX 456
Y L + P I H + D F++HL GISSI + N
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 457 ITTI 468
+ T+
Sbjct: 168 LGTL 171
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.0 bits (114), Expect = 3e-05
Identities = 42/128 (32%), Positives = 50/128 (39%)
Frame = +1
Query: 85 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII* 264
L G +IG QI VTA A L PL +GAP +A PR+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 265 DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIXG 444
F PP L P AH +VDL F LHLAGISS G
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLG 150
Query: 445 AXNXITTI 468
+ N + T+
Sbjct: 151 SMNFLVTL 158
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 373 AHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
AH G SVD+A FSLHLAG+SSI G+ N +TT+I
Sbjct: 78 AHAGASVDMAIFSLHLAGVSSILGSVNFMTTVI 110
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 48.0 bits (109), Expect = 1e-04
Identities = 35/129 (27%), Positives = 52/129 (40%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL + +YN ++T+H N +PL++ A D+AFPRI
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F PP + L + +T + L +VD+ LHL G+S+
Sbjct: 155 IAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMSSPAVDMMMLGLHLTGVSATM 214
Query: 442 GAXNXITTI 468
GA N I TI
Sbjct: 215 GAINFIATI 223
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +1
Query: 352 PHFHLISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTII 471
P + H G SVD A FSLHLAG SSI GA I+TII
Sbjct: 25 PPLASVVGHGGSSVDFAIFSLHLAGASSIMGAMYFISTII 64
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 44.0 bits (99), Expect = 0.002
Identities = 35/129 (27%), Positives = 53/129 (41%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL +PG + +Y++I+T HA N +PL++ D++ PR+
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
L+ L P G +DLA FSLH+AG+SSI
Sbjct: 102 LSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIA 161
Query: 442 GAXNXITTI 468
G+ N + TI
Sbjct: 162 GSINFLVTI 170
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 44.0 bits (99), Expect = 0.002
Identities = 39/130 (30%), Positives = 53/130 (40%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL P ++YN ++T H N L+PL++G D+AFPR+
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F PP Q + P L+S G +L SL L G SSI
Sbjct: 114 VAFWLTPPGGILLISSFFVGAPQAGWTSYPP-LSLLSGKWGE--ELWILSLLLVGTSSIL 170
Query: 442 GAXNXITTII 471
GA N +TTI+
Sbjct: 171 GAINFVTTIL 180
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 42.7 bits (96), Expect = 0.005
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 42.3 bits (95), Expect = 0.006
Identities = 37/128 (28%), Positives = 48/128 (37%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL PG I D YN T H N ++PL+LGA D+AFPR+ +
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
Y L + +TP+ SAH +V F + G SSI
Sbjct: 130 LSLYIYLAGAVLALWGMLNGGLDTGWTFYTPY----SAHTTTTVAPVLFGAFIIGFSSIV 185
Query: 442 GAXNXITT 465
N I T
Sbjct: 186 TGINFIVT 193
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 41.1 bits (92), Expect = 0.015
Identities = 37/130 (28%), Positives = 52/130 (40%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
+L P L D +YN VT H N L+P PD+ FPR+
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
F P L L + F P +S SV+ + FSLHLAGI+S+
Sbjct: 95 LSFWLMPFSLSL-----LLFSMASAGWTFYPPLSSLSP----SVEFSVFSLHLAGIASLI 145
Query: 442 GAXNXITTII 471
+ N + T++
Sbjct: 146 SSCNFLVTML 155
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 39.9 bits (89), Expect = 0.034
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 365
P NN+ F +VENGAGTG TVYPPLSS
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSS 50
Score = 36.7 bits (81), Expect = 0.31
Identities = 24/65 (36%), Positives = 31/65 (47%)
Frame = +1
Query: 217 LILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVD 396
L+LGAPD+AFPR+ F PP L + + P +AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 397 LAXFS 411
LA +S
Sbjct: 61 LAIYS 65
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 39.5 bits (88), Expect = 0.045
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL PG I D YN + T H N L+P+++GA D+AFP++ +
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 262 *DFDSY 279
F Y
Sbjct: 123 LSFYVY 128
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.5 bits (88), Expect = 0.045
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = +1
Query: 121 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY* 300
+YN +VT H N +P+ L D+ PR+ P ++Y
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFY- 209
Query: 301 FQEEL*KMVQEQDEQFTPHFHL-ISAHRGRSVDLAXFSLHLAGISSIXGAXNXITTI 468
EL + +T + L I G VD FSLHLAG+SS+ G+ N I+TI
Sbjct: 210 --MEL-SLYYGCGIGWTLYPPLSIWEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTI 263
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 39.1 bits (87), Expect = 0.059
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 256 II*DFDSYPPPL 291
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 38.7 bits (86), Expect = 0.078
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 94 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.7 bits (81), Expect = 0.31
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 34.3 bits (75), Expect = 1.7
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFT-PHFHLIS--AHRGRSVDLAXFSLHLAGIS 432
F P ++ P L + H L ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 433 SIXGAXNXITTII 471
SI GA N +TTII
Sbjct: 183 SIMGAINFVTTII 195
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 34.3 bits (75), Expect = 1.7
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 202 N*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQDE-QFTPHFHLISAH 378
N LVP ++GAPD+ +PRI F P + + L Q D +T + L +
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLL--FWQHGDSIGWTLYPPLSTIS 143
Query: 379 RGRSVDLAXFSLHLAGISSIXGAXNXITTI 468
+ VDL + +AG SS N I TI
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTI 173
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 34.3 bits (75), Expect = 1.7
Identities = 30/129 (23%), Positives = 48/129 (37%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 262 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISAHRGRSVDLAXFSLHLAGISSIX 441
+ ++ + ++ SA VD ++ L G SS+
Sbjct: 112 FSYWAFLGAIVLALMSYF--FPGGAPSVGWTFYYPFSAQSESGVDFYLAAILLLGFSSLL 169
Query: 442 GAXNXITTI 468
G N + TI
Sbjct: 170 GNANFVATI 178
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 33.5 bits (73), Expect = 2.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 79 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 118 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
+ Y +VT HA N L+PL++GA D+AFP +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTL 131
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 260 YKILTPTPLPYIINFKKNCRKWCRNRMNSLP 352
+KIL TPL Y N C K C + +NSLP
Sbjct: 84 FKILIITPLTYTTNSIYGCSKRCSHSVNSLP 114
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
+LG P + +YN + T H N +VPL++GA D+AFPR+
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRL 115
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 6.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 278 TPLPYIINFKKNCRKWCRN 334
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,365,661
Number of Sequences: 1657284
Number of extensions: 5659712
Number of successful extensions: 10112
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 9757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10018
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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