Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0541
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.21 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.83 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.3  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +2

Query: 113  LDSKIKILDSPGIVFQSGPESDSTVALKNAIRVGSLKDPVTPATAILRG 259
            L   IK   + G+  Q   ++  T      IRV  +  P+T A  +++G
Sbjct: 1087 LSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKG 1135


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -2

Query: 225  SFRLPTRIAFLSATVESLSGPDWNTIPGLSRILIFESSWTVCICLV 88
            SF L T+  F    V  L   DW  +  L  +    ++  VCIC V
Sbjct: 883  SFLLVTQTIFALCVVLQLQENDWLQLGYLIFVSTLYTANVVCICHV 928


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 168 GPDWNTIPGLSRILIFES 115
           GP+WN + GL  +   ++
Sbjct: 286 GPEWNLLDGLDAVAFIDN 303


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 168 GPDWNTIPGLSRILIFES 115
           GP+WN + GL  +   ++
Sbjct: 287 GPEWNLLDGLDAVAFIDN 304


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 168 GPDWNTIPGLSRILIFES 115
           GP+WN + GL  +   ++
Sbjct: 287 GPEWNLLDGLDAVAFIDN 304


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +2

Query: 437 RSLPRQXTLIXNVGRPNXGFHREGF*HQLP 526
           RS   Q T    VG P  G  REGF  Q P
Sbjct: 422 RSFTLQFTNETQVGAPIKGPGREGFYTQNP 451


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,825
Number of Sequences: 336
Number of extensions: 2630
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)