Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0541
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 72 3e-13
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 72 3e-13
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 72 3e-13
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 63 1e-10
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 63 1e-10
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 63 1e-10
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 39 0.002
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 35 0.037
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 35 0.037
Z92834-10|CAB07393.1| 439|Caenorhabditis elegans Hypothetical p... 33 0.11
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 29 3.2
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 4.3
Z93393-3|CAB54438.2| 388|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 106 bits (255), Expect = 1e-23
Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGPESDS-TV 187
PNVGKSS+INSL R KACNVG+ PG+TK++Q V+LD I+++DSPG++ S + D V
Sbjct: 268 PNVGKSSVINSLKRRKACNVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQKDLDPIEV 327
Query: 188 ALKNAIRVGSLKDPVTPATAILR 256
ALKNAIRV +L DP+ P AILR
Sbjct: 328 ALKNAIRVDNLLDPIAPVHAILR 350
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = +1
Query: 256 RANKQTLQDLYRIPDFSTPQEFFAQLAQRMGRFKKGGVPDQEAASRILLNDWNIGXVRYF 435
R +K+T+ Y + DF++ +F AQLA+R+G+ ++G PD AA++ +LNDWN G +RY+
Sbjct: 351 RCSKETIMLHYNLADFNSVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYY 410
Query: 436 TEPSETXDA 462
T P E A
Sbjct: 411 THPPEQGTA 419
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVA 190
PNVGKSS++N+L + K C G TK Q V L +I ++DSPG+V+ G +S++ +
Sbjct: 334 PNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG-DSETQII 392
Query: 191 LKNAIRVGSLKDPVTPATAIL 253
LK +RV ++KDP +L
Sbjct: 393 LKGVVRVENVKDPENHVQGVL 413
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1
Query: 256 RANKQTLQDLYRIPDFSTPQEFFAQLAQRMGRFKKGGVPDQEAASRILLNDWNIGXVRYF 435
R + L+ Y IP+F+ +F ++A + GR KGG PD A S+++LN++ G + YF
Sbjct: 415 RCKPEHLRRQYGIPEFTDVDDFLTKIAIKQGRLLKGGDPDIVAVSKVVLNEFQRGKLPYF 474
Query: 436 TEP 444
P
Sbjct: 475 VPP 477
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVA 190
PNVGKSS++N+L + K C G TK Q V L +I ++DSPG+V+ G +S++ +
Sbjct: 275 PNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG-DSETQII 333
Query: 191 LKNAIRVGSLKDPVTPATAIL 253
LK +RV ++KDP +L
Sbjct: 334 LKGVVRVENVKDPENHVQGVL 354
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1
Query: 256 RANKQTLQDLYRIPDFSTPQEFFAQLAQRMGRFKKGGVPDQEAASRILLNDWNIGXVRYF 435
R + L+ Y IP+F+ +F ++A + GR KGG PD A S+++LN++ G + YF
Sbjct: 356 RCKPEHLRRQYGIPEFTDVDDFLTKIAIKQGRLLKGGDPDIVAVSKVVLNEFQRGKLPYF 415
Query: 436 TEP 444
P
Sbjct: 416 VPP 418
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVA 190
PNVGKSS++N+L + K C G TK Q V L +I ++DSPG+V+ G +S++ +
Sbjct: 334 PNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG-DSETQII 392
Query: 191 LKNAIRVGSLKDPVTPATAIL 253
LK +RV ++KDP +L
Sbjct: 393 LKGVVRVENVKDPENHVQGVL 413
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1
Query: 256 RANKQTLQDLYRIPDFSTPQEFFAQLAQRMGRFKKGGVPDQEAASRILLNDWNIGXVRYF 435
R + L+ Y IP+F+ +F ++A + GR KGG PD A S+++LN++ G + YF
Sbjct: 415 RCKPEHLRRQYGIPEFTDVDDFLTKIAIKQGRLLKGGDPDIVAVSKVVLNEFQRGKLPYF 474
Query: 436 TEP 444
P
Sbjct: 475 VPP 477
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVA 190
PNVGKSS IN L K +V +TPG T+ QT+ +DS++ + D PG+V S S +
Sbjct: 138 PNVGKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSFGRSEMF 197
Query: 191 LKNAIRVGSLKDPVTPATAIL 253
L + V ++D P + +L
Sbjct: 198 LNGILPVDQMRDHFGPTSLLL 218
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVA 190
PNVGKSS IN L K +V +TPG T+ QT+ +DS++ + D PG+V S S +
Sbjct: 138 PNVGKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSFGRSEMF 197
Query: 191 LKNAIRVGSLKDPVTPATAIL 253
L + V ++D P + +L
Sbjct: 198 LNGILPVDQMRDHFGPTSLLL 218
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVA 190
PNVGKSS IN L K +V +TPG T+ QT+ +DS++ + D PG+V S S +
Sbjct: 307 PNVGKSSTINKLAGGKKVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSFGRSEMF 366
Query: 191 LKNAIRVGSLKDPVTPATAIL 253
L + V ++D P + +L
Sbjct: 367 LNGILPVDQMRDHFGPTSLLL 387
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 9/57 (15%)
Frame = +2
Query: 11 PNVGKSSIINSLN------RSKACNVGSTPGVTKQMQT-VQLDSK--IKILDSPGIV 154
PNVGKSS+IN++ + KA G+ PGVT ++Q V++ K + I+D+PG++
Sbjct: 124 PNVGKSSLINAIRTHTLGIKRKAVEAGARPGVTVRVQNRVRILDKPPVYIIDTPGVL 180
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 35.1 bits (77), Expect = 0.037
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKI---KILDSPGIVFQSGPESDS 181
PNVGKSS IN++ R+ V TK + LD + +++D+PGI+ Q E +
Sbjct: 178 PNVGKSSFINNVTRADV-EVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQP-LEDRN 235
Query: 182 TVALKNAIRVGSLKDPV 232
T+ ++ + LK V
Sbjct: 236 TIEMQAVTALAHLKASV 252
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 35.1 bits (77), Expect = 0.037
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKI---KILDSPGIVFQSGPESDS 181
PNVGKSS IN++ R+ V TK + LD + +++D+PGI+ Q E +
Sbjct: 178 PNVGKSSFINNVTRADV-EVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQP-LEDRN 235
Query: 182 TVALKNAIRVGSLKDPV 232
T+ ++ + LK V
Sbjct: 236 TIEMQAVTALAHLKASV 252
>Z92834-10|CAB07393.1| 439|Caenorhabditis elegans Hypothetical
protein F39B2.7 protein.
Length = 439
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVTK-QMQT-VQLDS-KIKILDSPGI 151
PN GKSSI+N L V S PG T+ ++T +Q++ + ++ D+ G+
Sbjct: 219 PNSGKSSILNQLAHDDVAIVSSIPGTTRDSLETIIQINGVRCRLTDTAGV 268
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 226 PSHTGYSYPTRANKQTLQDLYRIPDFSTPQEFFAQLAQ 339
P+ GYSY T N T DL + ++ ++FF + Q
Sbjct: 113 PAGVGYSYATDGNITTNDDLTSLENYEAVKQFFTEFPQ 150
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 8 SPNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQL---DSKIKILDSPGIVFQS 163
+PNVGKS + NSL R V S T + + + +++ +DSPG V S
Sbjct: 41 APNVGKSLLTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVSTS 95
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 8 SPNVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQL---DSKIKILDSPGIVFQS 163
+PNVGKS + NSL R V S T + + + +++ +DSPG V S
Sbjct: 41 APNVGKSLLTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVSTS 95
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 229 SHTGYSYPTRANKQTLQDL 285
SH G++YP+R N L+DL
Sbjct: 517 SHVGFTYPSRPNNPVLKDL 535
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 121 KDQNPGQSWYSIPIRPGE*FNGSTQECYPRWQPKRPSHTG 240
+D NPGQ S P+ PGE G+ E P+ P +P G
Sbjct: 198 QDGNPGQDAPSEPLVPGE--PGAPGEAGPQGPPGQPGTPG 235
>Z93393-3|CAB54438.2| 388|Caenorhabditis elegans Hypothetical
protein Y48E1B.2b protein.
Length = 388
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 14 NVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGP 169
N GKS++ N+L +S C V + V + ++ + I +L P V + GP
Sbjct: 12 NAGKSTMFNALLQSDLCKVRAVDLVDRATTSIWPGTTISLLKFP--VMKPGP 61
>Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical
protein Y48E1B.2a protein.
Length = 890
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 14 NVGKSSIINSLNRSKACNVGSTPGVTKQMQTVQLDSKIKILDSPGIVFQSGP 169
N GKS++ N+L +S C V + V + ++ + I +L P V + GP
Sbjct: 514 NAGKSTMFNALLQSDLCKVRAVDLVDRATTSIWPGTTISLLKFP--VMKPGP 563
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 83 GVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVALKNAIRVGSLKDPVTPATAILR 256
G+T+ + ++L+ ++ ++ VFQ D+ V + A G K + A AILR
Sbjct: 1056 GLTRSVPQLELEKALQTANAFNFVFQFPQGLDTLVGERGAQLSGGQKQRIAIARAILR 1113
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 83 GVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVALKNAIRVGSLKDPVTPATAILR 256
G+T+ + ++L+ ++ ++ VFQ D+ V + A G K + A AILR
Sbjct: 1115 GLTRSVPQLELEKALQTANAFNFVFQFPQGLDTLVGERGAQLSGGQKQRIAIARAILR 1172
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 83 GVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVALKNAIRVGSLKDPVTPATAILR 256
G+T+ + ++L+ ++ ++ VFQ D+ V + A G K + A AILR
Sbjct: 1115 GLTRSVPQLELEKALQTANAFNFVFQFPQGLDTIVGERGAQLSGGQKQRIAIARAILR 1172
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 83 GVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVALKNAIRVGSLKDPVTPATAILR 256
G+T+ + ++++ ++I ++ VFQ D+ V + A G K + AILR
Sbjct: 1101 GLTRNISQTEIENALQIANAFNFVFQLPQGLDTIVGDRGAQLSGGQKQRIAITRAILR 1158
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 83 GVTKQMQTVQLDSKIKILDSPGIVFQSGPESDSTVALKNAIRVGSLKDPVTPATAILR 256
G+T+ + ++++ ++I ++ VFQ D+ V + A G K + AILR
Sbjct: 1101 GLTRNISQTEIENALQIANAFNFVFQLPQGLDTIVGDRGAQLSGGQKQRIAITRAILR 1158
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 11 PNVGKSSIINSLNRSKACNVGSTPGVT--KQMQTVQLD--SKIKILDSPGIVFQS 163
PN GKSS++ +++R+K V S P T + V + +I + D PG++ S
Sbjct: 197 PNAGKSSLLRAISRAKP-KVASYPFTTLHPHIGVVFYEDFEQIAVADIPGLIEDS 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,475,161
Number of Sequences: 27780
Number of extensions: 251903
Number of successful extensions: 567
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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