Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0537
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    30   0.86 
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    30   0.86 
Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    28   4.6  
AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    27   6.1  
AC006708-1|AAL77186.1|  129|Caenorhabditis elegans Hypothetical ...    27   8.0  

>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 62  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 175
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 62  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 175
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
           protein Y57G11B.5 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +2

Query: 32  MWKTVLITIFAAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGL 199
           M+K+++ +   A  +A   S +T  +        AED  P   A  R F  C K +
Sbjct: 1   MFKSLVFSALLAYAVAAPMSSMTTAIDRIDQIFQAEDSTPACNAETRRFNACFKDI 56


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 149 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 247
           PE E  +RT G+   G++D+N  +   + A+PN
Sbjct: 64  PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96


>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +2

Query: 62  AAGVLADDFSQITAVVTSQCTK---NNAEDKVPEVEAALRTFGN 184
           AAG+    +SQI A +T +CTK     A  K PE    + T+ N
Sbjct: 6   AAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWEN 49


>AC006708-1|AAL77186.1|  129|Caenorhabditis elegans Hypothetical
           protein Y110A7A.20 protein.
          Length = 129

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
 Frame = +2

Query: 65  AGVLADDFSQITAVVTSQCTK-NNAEDKVPEVEAALRTFGNCLKGLVD-----LNVLKTE 226
           AG+  DDF+++  +         +A+DK  E    L+ F     GL+D      NV++TE
Sbjct: 9   AGLFVDDFNRLRLIDPDVAELLQSAQDKSSEFNDQLKNFQTTTGGLIDSIEEFANVVETE 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,540,491
Number of Sequences: 27780
Number of extensions: 190254
Number of successful extensions: 475
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)