Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0535
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4S822 Cluster: Chromosome 9 SCAF14710, whole genome sh... 53 3e-06
UniRef50_Q12962 Cluster: Transcription initiation factor TFIID s... 52 8e-06
UniRef50_Q9XZT7 Cluster: Transcription initiation factor TFIID s... 48 1e-04
UniRef50_O60171 Cluster: Transcription factor TFIID complex subu... 44 0.002
UniRef50_Q4PED4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.003
UniRef50_Q6C5H3 Cluster: Yarrowia lipolytica chromosome E of str... 42 0.008
UniRef50_Q765H9 Cluster: TATA box-binding protein associated fac... 41 0.011
UniRef50_Q12030 Cluster: Transcription initiation factor TFIID s... 40 0.034
UniRef50_Q6BNN8 Cluster: Debaryomyces hansenii chromosome E of s... 39 0.044
UniRef50_Q95ZS0 Cluster: Taf (Tbp-associated transcription facto... 38 0.14
UniRef50_Q5DHZ9 Cluster: SJCHGC09252 protein; n=1; Schistosoma j... 37 0.24
UniRef50_Q9U5W9 Cluster: Transcription initiation factor TFIID s... 36 0.31
UniRef50_UPI0000499444 Cluster: hypothetical protein 68.t00035; ... 33 3.8
UniRef50_Q26B35 Cluster: Putative uncharacterized protein; n=1; ... 32 6.7
UniRef50_A4VWY4 Cluster: Predicted metalloprotease; n=27; Bacter... 32 6.7
>UniRef50_Q4S822 Cluster: Chromosome 9 SCAF14710, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF14710, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 227
Score = 52.8 bits (121), Expect = 3e-06
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
YYLN GFE+ DPR++RLI+LASQKF+SDI
Sbjct: 146 YYLNRAGFEASDPRIIRLISLASQKFISDI 175
>UniRef50_Q12962 Cluster: Transcription initiation factor TFIID
subunit 10 (Transcription initiation factor TFIID 30 kDa
subunit) (TAF(II)30); n=31; Eumetazoa|Rep: Transcription
initiation factor TFIID subunit 10 (Transcription
initiation factor TFIID 30 kDa subunit) (TAF(II)30) -
Homo sapiens (Human)
Length = 218
Score = 51.6 bits (118), Expect = 8e-06
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
YYLN GFE+ DPR++RLI+LA+QKF+SDI
Sbjct: 137 YYLNRAGFEASDPRIIRLISLAAQKFISDI 166
Score = 32.7 bits (71), Expect = 3.8
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 196 LGDFLLQLENYNPSIPDSV 252
L DFL+QLE+Y P+IPD+V
Sbjct: 116 LVDFLMQLEDYTPTIPDAV 134
>UniRef50_Q9XZT7 Cluster: Transcription initiation factor TFIID
subunit 10b (Transcription initiation factor TFIID 16
kDa subunit) (TAFII-16) (TAFII16) (dTAF(II)16); n=2;
Sophophora|Rep: Transcription initiation factor TFIID
subunit 10b (Transcription initiation factor TFIID 16
kDa subunit) (TAFII-16) (TAFII16) (dTAF(II)16) -
Drosophila melanogaster (Fruit fly)
Length = 146
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/32 (59%), Positives = 29/32 (90%)
Frame = +3
Query: 255 AYYLNLTGFESQDPRLVRLIALASQKFLSDIV 350
++YLN+ GF+S D R+VRLI+LA+QK++SDI+
Sbjct: 61 SHYLNMGGFQSDDKRIVRLISLAAQKYMSDII 92
>UniRef50_O60171 Cluster: Transcription factor TFIID complex subunit
Taf10; n=1; Schizosaccharomyces pombe|Rep: Transcription
factor TFIID complex subunit Taf10 - Schizosaccharomyces
pombe (Fission yeast)
Length = 215
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
YYL+L+GF+ DPRL +L+ L +QKF+SD+
Sbjct: 114 YYLSLSGFKCVDPRLKKLLGLTAQKFISDV 143
>UniRef50_Q4PED4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 386
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
+YL GFE DPRL RL++LA++KF+SDI
Sbjct: 278 FYLEKVGFECHDPRLKRLLSLAAEKFVSDI 307
>UniRef50_Q6C5H3 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 271
Score = 41.5 bits (93), Expect = 0.008
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
YYL +GF++ D R+ RL+ALA+QKF+SD+
Sbjct: 169 YYLAKSGFQTNDVRIKRLLALATQKFISDL 198
>UniRef50_Q765H9 Cluster: TATA box-binding protein associated factor
10; n=8; Magnoliophyta|Rep: TATA box-binding protein
associated factor 10 - Flaveria trinervia (Clustered
yellowtops) (Oedera trinervia)
Length = 136
Score = 41.1 bits (92), Expect = 0.011
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDIVI 353
+YL +GF+ D RL RL+A+A+QKF+SDI I
Sbjct: 39 HYLAKSGFQCPDVRLTRLVAVAAQKFVSDIAI 70
>UniRef50_Q12030 Cluster: Transcription initiation factor TFIID
subunit 10; n=4; Saccharomycetaceae|Rep: Transcription
initiation factor TFIID subunit 10 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 206
Score = 39.5 bits (88), Expect = 0.034
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
YYL GF D R+ RL+ALA+QKF+SDI
Sbjct: 95 YYLTKNGFNVADVRVKRLLALATQKFVSDI 124
>UniRef50_Q6BNN8 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=7;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 223
Score = 39.1 bits (87), Expect = 0.044
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
YYL GFE+ D ++ RL+ALA+QKF+ D+
Sbjct: 93 YYLAKNGFETSDVKIKRLLALATQKFILDV 122
>UniRef50_Q95ZS0 Cluster: Taf (Tbp-associated transcription factor)
family protein 10, isoform b; n=3; Caenorhabditis|Rep:
Taf (Tbp-associated transcription factor) family protein
10, isoform b - Caenorhabditis elegans
Length = 179
Score = 37.5 bits (83), Expect = 0.14
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDIVI 353
++L G + DPR+ R+I+LA+QK +SDI++
Sbjct: 100 HFLKSAGVDGSDPRVTRMISLAAQKHVSDIIL 131
>UniRef50_Q5DHZ9 Cluster: SJCHGC09252 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09252 protein - Schistosoma
japonicum (Blood fluke)
Length = 203
Score = 36.7 bits (81), Expect = 0.24
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 282 ESQDPRLVRLIALASQKFLSDIV 350
E+ DPRL RL++LA QKFL+DI+
Sbjct: 90 ENSDPRLARLVSLAGQKFLTDIL 112
>UniRef50_Q9U5W9 Cluster: Transcription initiation factor TFIID
subunit 10 (Transcription initiation factor TFIID 24 kDa
subunit) (TAFII-24) (TAFII24) (dTAF(II)24); n=1;
Drosophila melanogaster|Rep: Transcription initiation
factor TFIID subunit 10 (Transcription initiation factor
TFIID 24 kDa subunit) (TAFII-24) (TAFII24) (dTAF(II)24)
- Drosophila melanogaster (Fruit fly)
Length = 167
Score = 36.3 bits (80), Expect = 0.31
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +3
Query: 258 YYLNLTGFESQDPRLVRLIALASQKFLSDI 347
+ L GF + DP++VRL+++++QKF+SDI
Sbjct: 78 HILKTAGFCTVDPKIVRLVSVSAQKFISDI 107
>UniRef50_UPI0000499444 Cluster: hypothetical protein 68.t00035;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 68.t00035 - Entamoeba histolytica HM-1:IMSS
Length = 80
Score = 32.7 bits (71), Expect = 3.8
Identities = 10/27 (37%), Positives = 22/27 (81%)
Frame = +3
Query: 270 LTGFESQDPRLVRLIALASQKFLSDIV 350
+ GF+SQD ++ + +ALA++KF+ +++
Sbjct: 3 MAGFQSQDKQIAKAVALATEKFMFEVI 29
>UniRef50_Q26B35 Cluster: Putative uncharacterized protein; n=1;
Flavobacteria bacterium BBFL7|Rep: Putative
uncharacterized protein - Flavobacteria bacterium BBFL7
Length = 330
Score = 31.9 bits (69), Expect = 6.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 352 ITMSDKNFCDANAINLTSLGSCDSNPVKFK*YAPRNRVWMDYNSQAEEG 206
+ + D + DA+A+ +GS D N F NR W+DY ++G
Sbjct: 226 LAVIDGSLVDAHAVLFQLIGSKDYNDWTFSSGVAYNRSWIDYELSGDDG 274
>UniRef50_A4VWY4 Cluster: Predicted metalloprotease; n=27;
Bacteria|Rep: Predicted metalloprotease - Streptococcus
suis (strain 05ZYH33)
Length = 311
Score = 31.9 bits (69), Expect = 6.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 166 MDDDGCAGHALGDFLLQLENYNPSIPDSVVH 258
+D+ A HA+GD LQ E Y ++PDS H
Sbjct: 251 IDEAMNAAHAVGDDTLQQEAYGRTVPDSFTH 281
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,474,062
Number of Sequences: 1657284
Number of extensions: 6231803
Number of successful extensions: 13409
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13407
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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