Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0534
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p pro...    87   1e-17
AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,...    87   1e-17
AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,...    87   1e-17
AE014297-356|AAN14323.1|  173|Drosophila melanogaster CG2051-PC,...    85   6e-17
AY061248-1|AAL28796.1|  341|Drosophila melanogaster LD18667p pro...    30   1.9  
AE014297-4193|AAO41605.1|  341|Drosophila melanogaster CG33213-P...    30   1.9  
BT022895-1|AAY55311.1|  341|Drosophila melanogaster IP12531p pro...    30   2.5  
BT022865-1|AAY55281.1|  335|Drosophila melanogaster IP12731p pro...    30   2.5  
BT022782-1|AAY55198.1|  341|Drosophila melanogaster IP14435p pro...    30   2.5  
BT022755-1|AAY55171.1|  341|Drosophila melanogaster IP14735p pro...    30   2.5  
BT022747-1|AAY55163.1|  341|Drosophila melanogaster IP14635p pro...    30   2.5  
BT022741-1|AAY55157.1|  341|Drosophila melanogaster IP14535p pro...    30   2.5  
BT022222-1|AAY54638.1|  341|Drosophila melanogaster IP12431p pro...    30   2.5  

>BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p
           protein.
          Length = 405

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = +2

Query: 23  YITNLDHFVSQLKKDESFTPHGKMLHAFNVTPFDGESRSFEVYYCETSTQGFLEYHQRLQ 202
           Y  NLD F+  L K + F P G+ +  +     DG  R FE+Y CE  +  FL++  RLQ
Sbjct: 106 YFINLDEFLKTLDKADKFQPFGEKISEYRRVSDDGSERLFEIYQCEYKSSSFLKFFARLQ 165

Query: 203 TFLLWYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHES 382
           TF+LW+VDAAS+ID DD       FL + ++ K      Q     YT +        ++ 
Sbjct: 166 TFILWFVDAASYIDTDDPQW--CYFL-SYEKYKNNDGQWQYATAGYTTVYEYYAYPQNKR 222

Query: 383 ---HKFLHYRPSRKLGICAQMLQAVYSXF 460
               + L   P +KLG+  Q+++++Y  +
Sbjct: 223 PRISQMLILPPFQKLGLATQLVESIYRFY 251



 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 32/102 (31%), Positives = 50/102 (49%)
 Frame = +1

Query: 256 QWTFFTVFEKYQTSEGSXXXXXXXXXXXXXXXXXPNHQRPRISQVLTLPPFKKTRNLCTN 435
           QW +F  +EKY+ ++G                  P ++RPRISQ+L LPPF+K   L T 
Sbjct: 184 QWCYFLSYEKYKNNDGQWQYATAGYTTVYEYYAYPQNKRPRISQMLILPPFQKL-GLATQ 242

Query: 436 VTGRILXLYK*YLK**ISQLKTPYXTFQRVRDYVXAKXL*KI 561
           +   I   Y+         ++ P   FQR+R++V A+   K+
Sbjct: 243 LVESIYRFYQSQKNVVDITVEDPSEDFQRLRNFVDARSCMKL 284


>AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,
           isoform B protein.
          Length = 405

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = +2

Query: 23  YITNLDHFVSQLKKDESFTPHGKMLHAFNVTPFDGESRSFEVYYCETSTQGFLEYHQRLQ 202
           Y  NLD F+  L K + F P G+ +  +     DG  R FE+Y CE  +  FL++  RLQ
Sbjct: 106 YFINLDEFLKTLDKADKFQPFGEKISEYRRVSDDGSERLFEIYQCEYKSSSFLKFFARLQ 165

Query: 203 TFLLWYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHES 382
           TF+LW+VDAAS+ID DD       FL + ++ K      Q     YT +        ++ 
Sbjct: 166 TFILWFVDAASYIDTDDPQW--CYFL-SYEKYKNNDGQWQYATAGYTTVYEYYAYPQNKR 222

Query: 383 ---HKFLHYRPSRKLGICAQMLQAVYSXF 460
               + L   P +KLG+  Q+++++Y  +
Sbjct: 223 PRISQMLILPPFQKLGLATQLVESIYRFY 251



 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 32/102 (31%), Positives = 50/102 (49%)
 Frame = +1

Query: 256 QWTFFTVFEKYQTSEGSXXXXXXXXXXXXXXXXXPNHQRPRISQVLTLPPFKKTRNLCTN 435
           QW +F  +EKY+ ++G                  P ++RPRISQ+L LPPF+K   L T 
Sbjct: 184 QWCYFLSYEKYKNNDGQWQYATAGYTTVYEYYAYPQNKRPRISQMLILPPFQKL-GLATQ 242

Query: 436 VTGRILXLYK*YLK**ISQLKTPYXTFQRVRDYVXAKXL*KI 561
           +   I   Y+         ++ P   FQR+R++V A+   K+
Sbjct: 243 LVESIYRFYQSQKNVVDITVEDPSEDFQRLRNFVDARSCMKL 284


>AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,
           isoform A protein.
          Length = 405

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = +2

Query: 23  YITNLDHFVSQLKKDESFTPHGKMLHAFNVTPFDGESRSFEVYYCETSTQGFLEYHQRLQ 202
           Y  NLD F+  L K + F P G+ +  +     DG  R FE+Y CE  +  FL++  RLQ
Sbjct: 106 YFINLDEFLKTLDKADKFQPFGEKISEYRRVSDDGSERLFEIYQCEYKSSSFLKFFARLQ 165

Query: 203 TFLLWYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHES 382
           TF+LW+VDAAS+ID DD       FL + ++ K      Q     YT +        ++ 
Sbjct: 166 TFILWFVDAASYIDTDDPQW--CYFL-SYEKYKNNDGQWQYATAGYTTVYEYYAYPQNKR 222

Query: 383 ---HKFLHYRPSRKLGICAQMLQAVYSXF 460
               + L   P +KLG+  Q+++++Y  +
Sbjct: 223 PRISQMLILPPFQKLGLATQLVESIYRFY 251



 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 32/102 (31%), Positives = 50/102 (49%)
 Frame = +1

Query: 256 QWTFFTVFEKYQTSEGSXXXXXXXXXXXXXXXXXPNHQRPRISQVLTLPPFKKTRNLCTN 435
           QW +F  +EKY+ ++G                  P ++RPRISQ+L LPPF+K   L T 
Sbjct: 184 QWCYFLSYEKYKNNDGQWQYATAGYTTVYEYYAYPQNKRPRISQMLILPPFQKL-GLATQ 242

Query: 436 VTGRILXLYK*YLK**ISQLKTPYXTFQRVRDYVXAKXL*KI 561
           +   I   Y+         ++ P   FQR+R++V A+   K+
Sbjct: 243 LVESIYRFYQSQKNVVDITVEDPSEDFQRLRNFVDARSCMKL 284


>AE014297-356|AAN14323.1|  173|Drosophila melanogaster CG2051-PC,
           isoform C protein.
          Length = 173

 Score = 85.0 bits (201), Expect = 6e-17
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = +2

Query: 23  YITNLDHFVSQLKKDESFTPHGKMLHAFNVTPFDGESRSFEVYYCETSTQGFLEYHQRLQ 202
           Y  NLD F+  L K + F P G+ +  +     DG  R FE+Y CE  +  FL++  RLQ
Sbjct: 89  YFINLDEFLKTLDKADKFQPFGEKISEYRRVSDDGSERLFEIYQCEYKSSSFLKFFARLQ 148

Query: 203 TFLLWYVDAASFIDVDD 253
           TF+LW+VDAAS+ID DD
Sbjct: 149 TFILWFVDAASYIDTDD 165


>AY061248-1|AAL28796.1|  341|Drosophila melanogaster LD18667p
           protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMTA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


>AE014297-4193|AAO41605.1|  341|Drosophila melanogaster CG33213-PA
           protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMTA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


>BT022895-1|AAY55311.1|  341|Drosophila melanogaster IP12531p
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMNA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


>BT022865-1|AAY55281.1|  335|Drosophila melanogaster IP12731p
           protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 122 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMNA 179

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 180 HYGPGALCFRCGQRL 194


>BT022782-1|AAY55198.1|  341|Drosophila melanogaster IP14435p
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMNA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


>BT022755-1|AAY55171.1|  341|Drosophila melanogaster IP14735p
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMNA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


>BT022747-1|AAY55163.1|  341|Drosophila melanogaster IP14635p
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMNA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


>BT022741-1|AAY55157.1|  341|Drosophila melanogaster IP14535p
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMNA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


>BT022222-1|AAY54638.1|  341|Drosophila melanogaster IP12431p
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +2

Query: 215 WYVDAASFIDVDDVSGHSSQFLRNIKRVKAVFDTLQLPMQLYTDIMPIQTINVHESHKFL 394
           WY+      D    + +S +FL  +     +F    +   +  D+   +T+  H+SH   
Sbjct: 128 WYLPEERPKDTGSEASNSDKFLTYVSENTFIFPNGMMECAVCGDVA--KTLLEHQSHMNA 185

Query: 395 HYRPSRKLGICAQML 439
           HY P      C Q L
Sbjct: 186 HYGPGALCFRCGQRL 200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,485,759
Number of Sequences: 53049
Number of extensions: 458536
Number of successful extensions: 1102
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)