Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0532
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   3.1  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   5.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.5  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +3

Query: 9   GIMKTFIVFVVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKT 173
           G + T++  V  ++L +  T  + + + ++  DC+ +     +   KLK G  +T
Sbjct: 11  GALLTYVSSVEYLILREIDTILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGITET 65


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 162 DFKTENEPLKKYALCMLIKSQLMTKDGKFKKT 257
           D  +    LK Y  C+L K +   +  K K T
Sbjct: 30  DILSNERLLKNYVNCLLDKGRCTPEGKKLKST 61


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 343 PSPNSLELCEMLPRERPEA 399
           P  N  E   + PRERP A
Sbjct: 302 PGQNPGEKTNIAPRERPRA 320


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +2

Query: 344 PHQTAWNYVKCYHEKDPKHALFL*THNPTQPFHT 445
           PH+    Y +C H K  + A       P   FHT
Sbjct: 484 PHELCDKYYRCVHGKPTEFAC-----RPGTVFHT 512


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 48  VLAQALTDEQKENLKKHRADCLSE 119
           ++ Q + DE++++  KH A  L+E
Sbjct: 121 IVPQNVLDEEEKSSTKHYAALLTE 144


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 415 LQEKSVLRVFLVVAFHI 365
           L+EK  +++FL   FHI
Sbjct: 484 LREKPDVKIFLPFRFHI 500


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 125 FRLGETVGSVFLQVLLLLICE 63
           ++L   VGS     L LLIC+
Sbjct: 3   YQLTACVGSAIAGFLFLLICD 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,742
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)