Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0530
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113438-1|AAM29443.1|  248|Drosophila melanogaster RE27758p pro...    71   9e-13
AY060877-1|AAL28425.1|  248|Drosophila melanogaster GM04029p pro...    71   9e-13
AE014134-59|AAF51533.1|  248|Drosophila melanogaster CG11488-PA ...    71   9e-13
AY075391-1|AAL68225.1|  565|Drosophila melanogaster LD26265p pro...    29   6.5  
AY075196-1|AAL68065.1|  608|Drosophila melanogaster AT13609p pro...    29   6.5  
AE014134-1621|AAF52762.1|  602|Drosophila melanogaster CG17005-P...    29   6.5  
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny...    28   8.6  

>AY113438-1|AAM29443.1|  248|Drosophila melanogaster RE27758p
           protein.
          Length = 248

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 34/111 (30%), Positives = 62/111 (55%)
 Frame = +1

Query: 250 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWF 429
           + + PH+ER  ++ +++PKY  P+          R E+  + + +NP+  I+ARE   W 
Sbjct: 32  RPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEIIAREVRNWL 88

Query: 430 NTSKMIVFLHVNPITMEDKTPVYAALIRIKMYLRTYGKKIVSLATXGTXYE 582
           + S+++ F H++ IT +D   V   L +  ++L++YG KI+  A   T YE
Sbjct: 89  DHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYE 139


>AY060877-1|AAL28425.1|  248|Drosophila melanogaster GM04029p
           protein.
          Length = 248

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 34/111 (30%), Positives = 62/111 (55%)
 Frame = +1

Query: 250 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWF 429
           + + PH+ER  ++ +++PKY  P+          R E+  + + +NP+  I+ARE   W 
Sbjct: 32  RPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEIIAREVRNWL 88

Query: 430 NTSKMIVFLHVNPITMEDKTPVYAALIRIKMYLRTYGKKIVSLATXGTXYE 582
           + S+++ F H++ IT +D   V   L +  ++L++YG KI+  A   T YE
Sbjct: 89  DHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYE 139


>AE014134-59|AAF51533.1|  248|Drosophila melanogaster CG11488-PA
           protein.
          Length = 248

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 34/111 (30%), Positives = 62/111 (55%)
 Frame = +1

Query: 250 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWF 429
           + + PH+ER  ++ +++PKY  P+          R E+  + + +NP+  I+ARE   W 
Sbjct: 32  RPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEIIAREVRNWL 88

Query: 430 NTSKMIVFLHVNPITMEDKTPVYAALIRIKMYLRTYGKKIVSLATXGTXYE 582
           + S+++ F H++ IT +D   V   L +  ++L++YG KI+  A   T YE
Sbjct: 89  DHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYE 139


>AY075391-1|AAL68225.1|  565|Drosophila melanogaster LD26265p
           protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = +1

Query: 151 TTKTENVIIKKNSFRASSMFSHSKEVSRENKYSKARLPHFERQLLLDLSKPKYGPPKYT- 327
           TT+T+   I+ NSF ++ M +  K+      Y KA+L      L  DL        +   
Sbjct: 253 TTRTKLASIEDNSFGSNDMVADLKKQLESELYEKAKLQEQVGSLERDLDNAAEAGLELNK 312

Query: 328 -LPDFLLCDRGEKKNKTEIDNPFER 399
            L + L    GE+ +K  +++  ++
Sbjct: 313 MLSEVLNGQNGEEAHKQRLESQLQQ 337


>AY075196-1|AAL68065.1|  608|Drosophila melanogaster AT13609p
           protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 278 SYYLIYQNLNMVRPSTHYPTFYFATEER--KRIKQKLTIPSKGFWP 409
           S+Y I Q L +   +  + +F FA+ +R  K +   LT+P +  WP
Sbjct: 204 SFYHITQPLWVQNITMSHLSFSFASRDRGLKLLNMNLTVPRQSVWP 249


>AE014134-1621|AAF52762.1|  602|Drosophila melanogaster CG17005-PA
           protein.
          Length = 602

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 278 SYYLIYQNLNMVRPSTHYPTFYFATEER--KRIKQKLTIPSKGFWP 409
           S+Y I Q L +   +  + +F FA+ +R  K +   LT+P +  WP
Sbjct: 204 SFYHITQPLWVQNITMSHLSFSFASRDRGLKLLNMNLTVPRQSVWP 249


>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
            cyclase protein.
          Length = 2248

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 301  PKYGPPKYTLPDFLLCDRGEKKNKTEIDNP 390
            PKY PP+YT P  +L  + +++ + +   P
Sbjct: 1484 PKYEPPRYTSPHTMLSQQHQQQQQHQHQQP 1513


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,679,199
Number of Sequences: 53049
Number of extensions: 526055
Number of successful extensions: 1200
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)