Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0527
         (484 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q75C93 Cluster: ACR023Wp; n=1; Eremothecium gossypii|Re...    36   0.63 
UniRef50_A5NWR2 Cluster: Putative uncharacterized protein; n=2; ...    34   1.5  
UniRef50_Q01ZQ0 Cluster: Putative uncharacterized protein precur...    33   3.4  
UniRef50_UPI0000F2C24B Cluster: PREDICTED: hypothetical protein;...    33   4.5  
UniRef50_Q9UIL4 Cluster: Kinesin-like protein KIF25; n=2; Euther...    33   4.5  
UniRef50_UPI0000DD7972 Cluster: PREDICTED: hypothetical protein;...    32   5.9  
UniRef50_UPI0000DA29E9 Cluster: PREDICTED: hypothetical protein;...    32   5.9  
UniRef50_A6R4N0 Cluster: Predicted protein; n=1; Ajellomyces cap...    32   5.9  
UniRef50_Q4JN17 Cluster: Predicted outer membrane protein SMc027...    32   7.8  
UniRef50_A6FWX5 Cluster: Putative uncharacterized protein; n=1; ...    32   7.8  
UniRef50_Q53N38 Cluster: Putative uncharacterized protein; n=1; ...    32   7.8  

>UniRef50_Q75C93 Cluster: ACR023Wp; n=1; Eremothecium gossypii|Rep:
           ACR023Wp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 769

 Score = 35.5 bits (78), Expect = 0.63
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 8   SLPRPSEPKPTSPARGAPCRPTNEALARRGRH 103
           S P P +P+PTSPA+ A  RP++ +L   G H
Sbjct: 548 SPPPPGDPQPTSPAQNATRRPSDASLGYPGSH 579


>UniRef50_A5NWR2 Cluster: Putative uncharacterized protein; n=2;
           Methylobacterium sp. 4-46|Rep: Putative uncharacterized
           protein - Methylobacterium sp. 4-46
          Length = 206

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +2

Query: 8   SLPRPSEPKPTSPARGAPCRPTNEA--LARRGRHGTTVAYIVDDSGS 142
           +LPRPS   PT P R  P  P   A  LARR  H    ++++ + GS
Sbjct: 141 ALPRPSAATPTKPERPPPRTPAPSAPQLARRD-HPAEASFLIGEKGS 186


>UniRef50_Q01ZQ0 Cluster: Putative uncharacterized protein
           precursor; n=1; Solibacter usitatus Ellin6076|Rep:
           Putative uncharacterized protein precursor - Solibacter
           usitatus (strain Ellin6076)
          Length = 697

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 17  RPSEPKPTSPARGAPCRPTNEALARRGRHGTTVAYIVDDSG 139
           R +  KP +P +G P  P+    AR  +   TVA +VDD G
Sbjct: 79  RATSAKPAAPVKGVPPPPSPPMAARPKQIRRTVALVVDDLG 119


>UniRef50_UPI0000F2C24B Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 466

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = +2

Query: 287 LLSKALGVDXILIVIICVNVSPKYGSDTLINLGYCLRS 400
           LL  ++G D  L+V++CV+   KY ++TL +LG+  R+
Sbjct: 374 LLQDSIGGDAKLLVLLCVSPCQKYLAETLQSLGFGSRA 411


>UniRef50_Q9UIL4 Cluster: Kinesin-like protein KIF25; n=2;
           Eutheria|Rep: Kinesin-like protein KIF25 - Homo sapiens
           (Human)
          Length = 384

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +2

Query: 287 LLSKALGVDXILIVIICVNVSPKYGSDTLINLGYCLRS 400
           LL   LG D  L+VI+C++ S ++ + TL  LG+ +R+
Sbjct: 323 LLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIRA 360


>UniRef50_UPI0000DD7972 Cluster: PREDICTED: hypothetical protein;
           n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 139

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 8   SLPRPSEPKPTSPARGAPCRPTNEALARRGRHGTTVAYIVDDSGSDHKFP 157
           +LPR + P P+ PA+  P R + E    RG     +    DD G    FP
Sbjct: 55  ALPRVAPPPPSPPAQARPLR-SPETRGHRGVAAVPLGLCADDLGGRSAFP 103


>UniRef50_UPI0000DA29E9 Cluster: PREDICTED: hypothetical protein;
           n=4; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 395

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 2   GTSLPRPSEPKPTSPARGAPCRPTNEALARRGR 100
           G+  PRP  P   +P R AP +P +    RRG+
Sbjct: 138 GSQHPRPPGPPSPAPIRAAPAQPVHPGSGRRGQ 170


>UniRef50_A6R4N0 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 830

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = +2

Query: 239 PISFLFRLVKHFQ*YGLLSKALGVDXILIVIICVNVSPKYGSDTLINLGYCLRSLVSTVS 418
           PI+      KHF+ +   S AL    +L + + V   P+   D  +  GYC+ +   TV 
Sbjct: 718 PITTKLTSKKHFEAWARFSFAL----VLAIGLAVRDGPEALMDECLMRGYCITTGAETVL 773

Query: 419 PKNTGDTAN 445
            K  GDT +
Sbjct: 774 AKANGDTCH 782


>UniRef50_Q4JN17 Cluster: Predicted outer membrane protein SMc02721;
           n=1; uncultured bacterium BAC13K9BAC|Rep: Predicted
           outer membrane protein SMc02721 - uncultured bacterium
           BAC13K9BAC
          Length = 731

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = -1

Query: 235 SMTAKSYISKYDTEXXXXXXXXXXXRWKFMVGARVVYDVGDGGSVTTTPRQSLVCWSAGC 56
           S+TAK Y +KY               WK  VG   V D G  G  T+T + S + W+  C
Sbjct: 289 SLTAKIYKAKYSRN------------WK-KVGEMTVDDDGSAGGDTSTVKMSAIDWTTNC 335

Query: 55  AA 50
           AA
Sbjct: 336 AA 337


>UniRef50_A6FWX5 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 535

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = -2

Query: 138 PESSTM*ATVVP*RPRLARASFVGRQGAPRAGEVGFGSEGLG 13
           P S T+ A VVP  P L+ A F G   APR G VG    G G
Sbjct: 2   PRSYTVKARVVPTEPGLSVARFTGL--APRRGNVGLALSGGG 41


>UniRef50_Q53N38 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 153

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 17  RPSEPKPTSPARGAPCRPTNEALARRGRHGT 109
           RP+   PT P   AP RP  +    RGR GT
Sbjct: 16  RPAAAAPTRPGAAAPARPQLQKNTERGRGGT 46


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,146,310
Number of Sequences: 1657284
Number of extensions: 7182560
Number of successful extensions: 25184
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25024
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)